Alias: 176_004_scaffold_8
| name | lists | location/seqs | annotations | notes |
|---|---|---|---|---|
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NECEvent2014_6_4_scaffold_8_1
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria
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Not on your lists |
comp(141..392)
----------------- DNA (252bp) protein (84aa) |
SSU ribosomal protein S20p
30S ribosomal protein S20 {ECO:0000256|HAMAP-Rule:MF_00500}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
30S ribosomal protein S20 {ECO:0000256|HAMAP-Rule:MF_00500}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
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| NECEvent2014_6_4_scaffold_8_2 |
Not on your lists |
589..2508
----------------- DNA (1920bp) protein (640aa) |
Elongation factor 4 {ECO:0000313|EMBL:ETJ18605.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
Elongation factor 4 {ECO:0000313|EMBL:ETJ18605.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
Translation elongation factor LepA
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NECEvent2014_6_4_scaffold_8_3
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria
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Not on your lists |
2627..3751
----------------- DNA (1125bp) protein (375aa) |
Putative coproporphyrinogen III oxidase of BS HemN-type, oxygen-independent , in heat shock gene cluster (EC:1.3.99.22)
Putative oxygen-independent coproporphyrinogen III oxidase {ECO:0000313|EMBL:EFE59594.1}; EC=1.3.99.22 {ECO:0000313|EMBL:EFE59594.1};; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales;
Putative oxygen-independent coproporphyrinogen III oxidase {ECO:0000313|EMBL:EFE59594.1}; EC=1.3.99.22 {ECO:0000313|EMBL:EFE59594.1};; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales;
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NECEvent2014_6_4_scaffold_8_4
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria
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Not on your lists |
3851..4828
----------------- DNA (978bp) protein (326aa) |
Heat-inducible transcription repressor HrcA
Heat-inducible transcription repressor HrcA {ECO:0000256|HAMAP-Rule:MF_00081, ECO:0000256|SAAS:SAAS00101987}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source=
Heat-inducible transcription repressor HrcA {ECO:0000256|HAMAP-Rule:MF_00081, ECO:0000256|SAAS:SAAS00101987}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source=
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| NECEvent2014_6_4_scaffold_8_5 |
Not on your lists |
4857..5489
----------------- DNA (633bp) protein (211aa) |
Heat shock protein GrpE
Protein grpE {ECO:0000313|EMBL:ETJ18608.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
Protein grpE {ECO:0000313|EMBL:ETJ18608.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
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NECEvent2014_6_4_scaffold_8_6
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria
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Not on your lists |
5545..7374
----------------- DNA (1830bp) protein (610aa) |
dnaK; molecular chaperone DnaK
Chaperone protein DnaK {ECO:0000255|HAMAP-Rule:MF_00332}; HSP70 {ECO:0000255|HAMAP-Rule:MF_00332}; Heat shock 70 kDa protein {ECO:0000255|HAMAP-Rule:MF_00332}; Heat shock protein 70 {ECO:0000255|HAMAP
Chaperone protein DnaK {ECO:0000255|HAMAP-Rule:MF_00332}; HSP70 {ECO:0000255|HAMAP-Rule:MF_00332}; Heat shock 70 kDa protein {ECO:0000255|HAMAP-Rule:MF_00332}; Heat shock protein 70 {ECO:0000255|HAMAP
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NECEvent2014_6_4_scaffold_8_7
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria
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Not on your lists |
7519..8640
----------------- DNA (1122bp) protein (374aa) |
molecular chaperone DnaJ
Chaperone protein DnaJ {ECO:0000255|HAMAP-Rule:MF_01152}; TaxID=176280 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 12228).;"
Chaperone protein DnaJ {ECO:0000255|HAMAP-Rule:MF_01152}; TaxID=176280 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 12228).;"
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NECEvent2014_6_4_scaffold_8_8
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria
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Not on your lists |
8644..9582
----------------- DNA (939bp) protein (313aa) |
Ribosomal protein L11 methyltransferase {ECO:0000255|HAMAP-Rule:MF_00735}; Short=L11 Mtase {ECO:0000255|HAMAP-Rule:MF_00735};; EC=2.1.1.- {ECO:0000255|HAMAP-Rule:MF_00735};; TaxID=176279 species="Bact
Ribosomal protein L11 methyltransferase {ECO:0000255|HAMAP-Rule:MF_00735}; Short=L11 Mtase {ECO:0000255|HAMAP-Rule:MF_00735};; EC=2.1.1.- {ECO:0000255|HAMAP-Rule:MF_00735};; TaxID=176279 species="Bact
prmA; ribosomal protein L11 methyltransferase
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NECEvent2014_6_4_scaffold_8_9
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria
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Not on your lists |
9599..10336
----------------- DNA (738bp) protein (246aa) |
Ribosomal RNA small subunit methyltransferase E (EC:2.1.1.-)
Ribosomal RNA small subunit methyltransferase E {ECO:0000256|PIRNR:PIRNR015601}; EC=2.1.1.193 {ECO:0000256|PIRNR:PIRNR015601};; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphyl
Ribosomal RNA small subunit methyltransferase E {ECO:0000256|PIRNR:PIRNR015601}; EC=2.1.1.193 {ECO:0000256|PIRNR:PIRNR015601};; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphyl
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NECEvent2014_6_4_scaffold_8_10
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria
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Not on your lists |
10342..11688
----------------- DNA (1347bp) protein (449aa) |
tRNA methylthiotransferase YqeV {ECO:0000313|EMBL:EFE59601.1}; EC=1.8.-.- {ECO:0000313|EMBL:EFE59601.1};; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Sta
tRNA methylthiotransferase YqeV {ECO:0000313|EMBL:EFE59601.1}; EC=1.8.-.- {ECO:0000313|EMBL:EFE59601.1};; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Sta
hypothetical protein
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NECEvent2014_6_4_scaffold_8_11
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria
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Not on your lists |
11814..11990
----------------- DNA (177bp) protein (59aa) |
rpsU; 30S ribosomal protein S21
30S ribosomal protein S21 {ECO:0000255|HAMAP-Rule:MF_00358}; TaxID=196620 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus (strain MW2).;"
30S ribosomal protein S21 {ECO:0000255|HAMAP-Rule:MF_00358}; TaxID=196620 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus (strain MW2).;"
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NECEvent2014_6_4_scaffold_8_12
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria
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Not on your lists |
12836..13546
----------------- DNA (711bp) protein (237aa) |
hypothetical protein
Nodulation efficiency protein D {ECO:0000313|EMBL:EFE59603.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
Nodulation efficiency protein D {ECO:0000313|EMBL:EFE59603.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
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NECEvent2014_6_4_scaffold_8_13
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria
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Not on your lists |
13561..14550
----------------- DNA (990bp) protein (330aa) |
hypothetical protein
UPF0365 protein HMPREF0794_0425 {ECO:0000256|HAMAP-Rule:MF_01562}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey)
UPF0365 protein HMPREF0794_0425 {ECO:0000256|HAMAP-Rule:MF_01562}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey)
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| NECEvent2014_6_4_scaffold_8_14 |
Not on your lists |
14566..15249
----------------- DNA (684bp) protein (228aa) |
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ETJ18618.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
Uncharacterized protein {ECO:0000313|EMBL:ETJ18618.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
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NECEvent2014_6_4_scaffold_8_15
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria
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Not on your lists |
15535..16482
----------------- DNA (948bp) protein (316aa) |
Phosphate starvation-inducible protein PhoH,predicted ATPase
PhoH family protein {ECO:0000313|EMBL:AAW54466.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
PhoH family protein {ECO:0000313|EMBL:AAW54466.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
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| NECEvent2014_6_4_scaffold_8_16 |
Not on your lists |
16483..16950
----------------- DNA (468bp) protein (156aa) |
hypothetical protein
Putative rRNA maturation factor {ECO:0000313|EMBL:ETJ18620.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
Putative rRNA maturation factor {ECO:0000313|EMBL:ETJ18620.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
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| NECEvent2014_6_4_scaffold_8_17 |
Not on your lists |
16952..17308
----------------- DNA (357bp) protein (119aa) |
dgkA; diacylglycerol kinase (EC:2.7.1.107)
Diacylglycerol kinase {ECO:0000313|EMBL:ETJ18621.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
Diacylglycerol kinase {ECO:0000313|EMBL:ETJ18621.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
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| NECEvent2014_6_4_scaffold_8_18 |
Not on your lists |
17308..17712
----------------- DNA (405bp) protein (135aa) |
Cytidine deaminase (EC:3.5.4.5)
Cytidine deaminase {ECO:0000313|EMBL:ETJ18622.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
Cytidine deaminase {ECO:0000313|EMBL:ETJ18622.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
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NECEvent2014_6_4_scaffold_8_19
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria
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Not on your lists |
17712..18611
----------------- DNA (900bp) protein (300aa) |
era; GTP-binding protein Era
GTPase Era {ECO:0000255|HAMAP-Rule:MF_00367}; TaxID=176280 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 12228).;"
GTPase Era {ECO:0000255|HAMAP-Rule:MF_00367}; TaxID=176280 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 12228).;"
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| NECEvent2014_6_4_scaffold_8_20 |
Not on your lists |
18637..19398
----------------- DNA (762bp) protein (254aa) |
recO; DNA repair protein RecO
DNA repair protein RecO {ECO:0000313|EMBL:ETJ18624.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
DNA repair protein RecO {ECO:0000313|EMBL:ETJ18624.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
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NECEvent2014_6_4_scaffold_8_21
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria
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Not on your lists |
comp(19528..20919)
----------------- DNA (1392bp) protein (464aa) |
Glycyl-tRNA synthetase (EC:6.1.1.14)
Glycine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00253, ECO:0000256|SAAS:SAAS00006545}; EC=6.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00253, ECO:0000256|SAAS:SAAS00015978};; Glycyl-tRNA synthetase {ECO:000025
Glycine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00253, ECO:0000256|SAAS:SAAS00006545}; EC=6.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00253, ECO:0000256|SAAS:SAAS00015978};; Glycyl-tRNA synthetase {ECO:000025
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NECEvent2014_6_4_scaffold_8_22
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria
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Not on your lists |
21387..21878
----------------- DNA (492bp) protein (164aa) |
ccpN; transcriptional repressor CcpN
CBS domain protein {ECO:0000313|EMBL:AAW54451.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
CBS domain protein {ECO:0000313|EMBL:AAW54451.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
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NECEvent2014_6_4_scaffold_8_23
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria
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Not on your lists |
21890..22708
----------------- DNA (819bp) protein (273aa) |
Putative pyruvate, phosphate dikinase regulatory protein {ECO:0000256|HAMAP-Rule:MF_00921}; Short=PPDK regulatory protein {ECO:0000256|HAMAP-Rule:MF_00921};; EC=2.7.11.32 {ECO:0000256|HAMAP-Rule:MF_00
Putative pyruvate, phosphate dikinase regulatory protein {ECO:0000256|HAMAP-Rule:MF_00921}; Short=PPDK regulatory protein {ECO:0000256|HAMAP-Rule:MF_00921};; EC=2.7.11.32 {ECO:0000256|HAMAP-Rule:MF_00
ATP/GTP-binding protein, SA1392 homolog
rbh
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NECEvent2014_6_4_scaffold_8_24
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria
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Not on your lists |
22882..24678
----------------- DNA (1797bp) protein (599aa) |
DNA primase (EC:2.7.7.-)
DNA primase {ECO:0000255|HAMAP-Rule:MF_00974}; EC=2.7.7.- {ECO:0000255|HAMAP-Rule:MF_00974};; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus
DNA primase {ECO:0000255|HAMAP-Rule:MF_00974}; EC=2.7.7.- {ECO:0000255|HAMAP-Rule:MF_00974};; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus
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NECEvent2014_6_4_scaffold_8_25
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria
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Not on your lists |
24949..26055
----------------- DNA (1107bp) protein (369aa) |
RNA polymerase sigma factor RpoD
RNA polymerase sigma factor SigA {ECO:0000255|HAMAP-Rule:MF_00963}; TaxID=176280 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 1
RNA polymerase sigma factor SigA {ECO:0000255|HAMAP-Rule:MF_00963}; TaxID=176280 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 1
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NECEvent2014_6_4_scaffold_8_26
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria
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Not on your lists |
26210..26899
----------------- DNA (690bp) protein (230aa) |
Putative tRNA-m1A22 methylase
Uncharacterized protein {ECO:0000313|EMBL:EFE59617.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
Uncharacterized protein {ECO:0000313|EMBL:EFE59617.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
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NECEvent2014_6_4_scaffold_8_27
Staphylococcus sp. DORA_6_22, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria
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Not on your lists |
26889..27989
----------------- DNA (1101bp) protein (367aa) |
Putative GTP cyclohydrolase 1 type 2 {ECO:0000256|RuleBase:RU004385}; EC=3.5.4.16 {ECO:0000256|RuleBase:RU004385};; GTP cyclohydrolase I {ECO:0000256|RuleBase:RU004385}; TaxID=1403935 species="Bacteri
Putative GTP cyclohydrolase 1 type 2 {ECO:0000256|RuleBase:RU004385}; EC=3.5.4.16 {ECO:0000256|RuleBase:RU004385};; GTP cyclohydrolase I {ECO:0000256|RuleBase:RU004385}; TaxID=1403935 species="Bacteri
FIG060293: Hypothetical protein
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NECEvent2014_6_4_scaffold_8_28
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria
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Not on your lists |
28024..29370
----------------- DNA (1347bp) protein (449aa) |
ATP-dependent RNA helicase YqfR
ATP-dependent RNA helicase, DEAD/DEAH box family {ECO:0000313|EMBL:AAW54537.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (s
ATP-dependent RNA helicase, DEAD/DEAH box family {ECO:0000313|EMBL:AAW54537.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (s
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NECEvent2014_6_4_scaffold_8_29
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria
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Not on your lists |
29380..30270
----------------- DNA (891bp) protein (297aa) |
Endonuclease IV (EC:3.1.21.2)
Probable endonuclease 4 {ECO:0000255|HAMAP-Rule:MF_00152}; EC=3.1.21.2 {ECO:0000255|HAMAP-Rule:MF_00152};; Endodeoxyribonuclease IV {ECO:0000255|HAMAP-Rule:MF_00152}; Endonuclease IV {ECO:0000255|HAMA
Probable endonuclease 4 {ECO:0000255|HAMAP-Rule:MF_00152}; EC=3.1.21.2 {ECO:0000255|HAMAP-Rule:MF_00152};; Endodeoxyribonuclease IV {ECO:0000255|HAMAP-Rule:MF_00152}; Endonuclease IV {ECO:0000255|HAMA
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NECEvent2014_6_4_scaffold_8_30
Staphylococcus sp. DORA_6_22, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria
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Not on your lists |
30488..31270
----------------- DNA (783bp) protein (261aa) |
Zinc ABC transporter, ATP-binding protein ZnuC
ABC transporter ATP-binding protein {ECO:0000313|EMBL:ETJ12427.1}; TaxID=1403935 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. DORA_6_22.;"
ABC transporter ATP-binding protein {ECO:0000313|EMBL:ETJ12427.1}; TaxID=1403935 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. DORA_6_22.;"
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