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NECEvent2014_6_5_scaffold_1554

Alias: 176_005_scaffold_1554

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_6_5_scaffold_1554_1
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(31..753)
DNA (723bp) protein (241aa)
Putative Transcriptional regulator, GntR family {ECO:0000313|EMBL:CDG02970.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridiu
GntR family transcriptional regulator
NECEvent2014_6_5_scaffold_1554_2
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

883..1050
DNA (168bp) protein (56aa)
hypothetical protein
Uncharacterized protein; TaxID=508767 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Alaska E43 / Type E3).;"
NECEvent2014_6_5_scaffold_1554_3
Clostridium intestinale, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1176..1403
DNA (228bp) protein (76aa)
Uncharacterized protein {ECO:0000313|EMBL:ERK32496.1}; TaxID=1294142 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium intestinale URNW.;"
hypothetical protein
NECEvent2014_6_5_scaffold_1554_4
Clostridium bornimense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1543..1770)
DNA (228bp) protein (76aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDM68242.1}; TaxID=1216932 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium bornimense.;"
NECEvent2014_6_5_scaffold_1554_5
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1773..2711)
DNA (939bp) protein (313aa)
Thioredoxin reductase {ECO:0000256|RuleBase:RU003881}; EC=1.8.1.9 {ECO:0000256|RuleBase:RU003881};; TaxID=498213 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;
thioredoxin reductase
NECEvent2014_6_5_scaffold_1554_6
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2860..3789)
DNA (930bp) protein (310aa)
ATPase {ECO:0000313|EMBL:AJG96837.1}; TaxID=1520 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (Clostridium MP).;"
ATPase
NECEvent2014_6_5_scaffold_1554_7
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3902..5080)
DNA (1179bp) protein (393aa)
clpB1; chaperone protein ClpB
Chaperone protein ClpB {ECO:0000313|EMBL:AGX41224.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 1
NECEvent2014_6_5_scaffold_1554_8
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5102..6103)
DNA (1002bp) protein (334aa)
Protein-arginine kinase {ECO:0000256|HAMAP-Rule:MF_00602, ECO:0000256|SAAS:SAAS00166216}; EC=2.7.14.1 {ECO:0000256|HAMAP-Rule:MF_00602, ECO:0000256|SAAS:SAAS00166206};; TaxID=1415774 species="Bacteria
ATP:guanido phosphotransferase (EC:2.7.3.-)
NECEvent2014_6_5_scaffold_1554_9
Clostridium intestinale, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6084..6626)
DNA (543bp) protein (181aa)
Uncharacterized protein {ECO:0000313|EMBL:ERK32457.1}; TaxID=1294142 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium intestinale URNW.;"
McsA protein
NECEvent2014_6_5_scaffold_1554_10
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6638..7093)
DNA (456bp) protein (152aa)
CtsR family transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:CDH89165.1}; Transcriptional regulator CtsR {ECO:0000313|EMBL:ACD22633.1}; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridia
NECEvent2014_6_5_scaffold_1554_11
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7249..7908
DNA (660bp) protein (220aa)
Zn-dependent hydrolase of the metallo-beta-lactamase superfamily
Zinc-dependent hydrolase {ECO:0000313|EMBL:AJG96833.1}; TaxID=1520 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (Clostridiu
NECEvent2014_6_5_scaffold_1554_12
Clostridium tetanomorphum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8113..8319)
DNA (207bp) protein (69aa)
Uncharacterized protein {ECO:0000313|EMBL:KAJ49948.1}; TaxID=1230342 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium tetanomorphum DSM 665.
hypothetical protein
NECEvent2014_6_5_scaffold_1554_13
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8332..9000)
DNA (669bp) protein (223aa)
PSP1 domain-containing protein
PSP1 domain protein {ECO:0000313|EMBL:EES48828.1}; TaxID=536233 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum E1 str. 'BoNT E B
Displaying 13 items

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