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NECEvent2014_6_5_scaffold_741_12

Organism: NECEvent2014_6_5_Clostridium_paraputrificum_30_193

near complete RP 48 / 55 MC: 1 BSCG 51 / 51 ASCG 14 / 38 MC: 1
Location: comp(10155..11324)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor SigA {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei similarity UNIPROT
DB: UniProtKB
  • Identity: 91.0
  • Coverage: 368.0
  • Bit_score: 660
  • Evalue 1.60e-186
rpoD; RNA polymerase sigma factor rpoD similarity KEGG
DB: KEGG
  • Identity: 91.6
  • Coverage: 371.0
  • Bit_score: 648
  • Evalue 9.80e-184

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Taxonomy

Clostridium chauvoei → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1170
ATGAGGAGCTTAAGAGGGAGAAAGGGGTTATTGGTCATGGCGAAAGGAGGTAAGAAAGAAATGGCAGAGGAAACTAAAGCAAAAAGCAAAAAGACTGGTAATGATAAGAAAGATAGAAATGACAAGATGGCCATTGTTAAGAATTTAATAGAAAAAGGTAAGAAGAATGGTTCATTAACTTATAAAGAAATTATGGATGACATAGAGAACATAGATTTAGGACCAGAACAAATAGAAAAGATTTATGAGGTTCTTGAATCTATGGGGATAGAAGTAATAGGTGATATTAATGGTGTTGAAGAGGTTGAAGAAGAAGTAGATCTTTCAATACCAGAAGGTATTGCTATTGATGACCCTGTTAGAATGTACTTAAAAGAAATAGGTAAGGTGCCATTATTATCTTCAGAAGAAGAAATAGAACTTGCTTTAAGAATTGAACAAGGGGATCAATATGCTAAGAAGAAGCTAGCTGAAGCTAACTTAAGACTTGTTGTAAGTATAGCTAAGAGATATGTTGGTAGAGGTATGTTATTCCTAGATCTTATTCAAGAAGGTAACTTAGGACTTATTAAAGCCGTTGAAAAGTTTGATTATAGAAAAGGGTTCAAATTCTCTACATATGCTACATGGTGGATAAGACAGGCGATTACAAGAGCTATAGCAGACCAAGCAAGAACAATTAGAATACCAGTTCATATGGTTGAAACTATAAATAAGCTTATAAGAGTACAAAGACAATTACTTCAAGAGTTAGGAAGAGATCCATTCCCAGAAGAGATTTCAAAGGTTATGGATTTACCAGTTGAAAAGGTAAGAGAAATTCAAAAAATAGCACAAGAGCCAGTTTCTTTAGAAACTCCAATCGGTGAAGAAGAAGATAGCCATTTAGGTGATTTCATTCCTGATGATGAAGCTCCAGCACCAGCAGAAGCTGCAGCATTTACTATGCTAAAAGAACAATTAATAAATGTTCTAGATACTTTAACTCCAAGAGAAGAAAAAGTATTAAGACTAAGATTTGGTCTTGATGATGGTAGAGCAAGAACTCTTGAAGAAGTAGGTAAAGAGTTCAATGTAACAAGAGAAAGAATAAGACAGATAGAAGCTAAAGCTTTAAGAAAGCTTAGACACCCATCAAGAAGTAAAAAGCTTAAGGATTATTTAGATTAA
PROTEIN sequence
Length: 390
MRSLRGRKGLLVMAKGGKKEMAEETKAKSKKTGNDKKDRNDKMAIVKNLIEKGKKNGSLTYKEIMDDIENIDLGPEQIEKIYEVLESMGIEVIGDINGVEEVEEEVDLSIPEGIAIDDPVRMYLKEIGKVPLLSSEEEIELALRIEQGDQYAKKKLAEANLRLVVSIAKRYVGRGMLFLDLIQEGNLGLIKAVEKFDYRKGFKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLIRVQRQLLQELGRDPFPEEISKVMDLPVEKVREIQKIAQEPVSLETPIGEEEDSHLGDFIPDDEAPAPAEAAAFTMLKEQLINVLDTLTPREEKVLRLRFGLDDGRARTLEEVGKEFNVTRERIRQIEAKALRKLRHPSRSKKLKDYLD*