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NECEvent2014_6_5_scaffold_1030_3

Organism: NECEvent2014_6_5_Clostridium_paraputrificum_30_193

near complete RP 48 / 55 MC: 1 BSCG 51 / 51 ASCG 14 / 38 MC: 1
Location: 1760..2539

Top 3 Functional Annotations

Value Algorithm Source
sigG; RNA polymerase sigma-G factor similarity KEGG
DB: KEGG
  • Identity: 93.0
  • Coverage: 257.0
  • Bit_score: 475
  • Evalue 9.90e-132
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.0
  • Coverage: 257.0
  • Bit_score: 475
  • Evalue 4.90e-131

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Taxonomy

Clostridium baratii → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 780
ATGACATTGATAATAAACAAGGTGGAAATATGCGGCGTAAATACTTCAAAACTTCCAGTACTTAAAGAAAAGGAAAAAAGAGAACTACTTTTAAAGATGCAACAAGGAGATAATTCTGCTAGAGAATCTTTTATAAAAGGAAATTTAAGATTAGTTTTAAGTGTTATACAAAGGTTTAATAATAGAGGAGAAAATGTAGATGATTTATTTCAAGTAGGATGTATAGGGTTGATGAAAGCAATAGATAACTTTGATTTGAGCCAAAATGTAAAGTTTTCTACATATGCAGTACCTATGATAATAGGCGAAATTAGAAGATATCTTAGAGATAATAATCCTATAAGAGTTAGTAGGTCTTTAAGAGATATAGCTTATAAGGCTTTAGTTGTTAGGGATAAACTAATAAAAGAAAATAATAAAGAGCCGACGATTTCTCAAATATCTAAGGAACTAAATATACCAAGAGAAGAAGTGGTATTTGCCTTAGATGCGATACAAGATCCAGTCTCATTATATGAGCCCATATACCATGATGGTGGAGATGCAATATATGTAATGGATCAAGTAAGTGATAATAAAAATACTGATGAGAATTGGTTAGAGAATATATCAATTAAAGAGGCTATGAAAAAGTTAAGTGATAGAGAAAAATTAATATTAAACCTAAGATTTTTTAATGGGAGAACTCAGATGGAAGTTGCAGAGGAAATTGGAATATCACAAGCACAAGTATCTCGTTTAGAAAAAACAGCATTAAAACATATGCGAAAACATGTATGA
PROTEIN sequence
Length: 260
MTLIINKVEICGVNTSKLPVLKEKEKRELLLKMQQGDNSARESFIKGNLRLVLSVIQRFNNRGENVDDLFQVGCIGLMKAIDNFDLSQNVKFSTYAVPMIIGEIRRYLRDNNPIRVSRSLRDIAYKALVVRDKLIKENNKEPTISQISKELNIPREEVVFALDAIQDPVSLYEPIYHDGGDAIYVMDQVSDNKNTDENWLENISIKEAMKKLSDREKLILNLRFFNGRTQMEVAEEIGISQAQVSRLEKTALKHMRKHV*