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NECEvent2014_6_5_scaffold_1036_3

Organism: NECEvent2014_6_5_Clostridium_paraputrificum_30_193

near complete RP 48 / 55 MC: 1 BSCG 51 / 51 ASCG 14 / 38 MC: 1
Location: 674..3421

Top 3 Functional Annotations

Value Algorithm Source
PTS system transcriptional activator {ECO:0000313|EMBL:ERK28972.1}; TaxID=1294142 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium intestina similarity UNIPROT
DB: UniProtKB
  • Identity: 48.5
  • Coverage: 913.0
  • Bit_score: 853
  • Evalue 3.10e-244
PTS system transcriptional activator similarity KEGG
DB: KEGG
  • Identity: 40.5
  • Coverage: 922.0
  • Bit_score: 682
  • Evalue 1.90e-193

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Taxonomy

Clostridium intestinale → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 2748
ATGACTAGGGATAATAGATATGAAGAAATATATCATTTCATATTAGAAACAACTAAATTACAAAGAGAAAATAATGAGAGAATAGGTGTAACAACAAATGAGGTGGCAGAGGGAATTGGTATAAAGAGAACTAATGCAAGTAGTGAGTTAAACAAACTTGTAAGAGATGGGTTAATAAAGAAAGAAGAAGGAAGGCCTGTAGTATATAAATGTATTGAGGATGATGAAGAAGTTGAAGTCATAAGTAGAAATGAAGTTGATGCATTTAATAAGTTTATTGGTTGCGAGGGAAGTTTAAAGAAGCCAATAAAGCAGGCAAAAGCGGCTATTAGTTATCCGCCAAGAGGACTTCACACCTTATTACTTGGTCCAACAGGTGTTGGTAAAACAATGTTTGCAGAAAAAATGTATGAGTATGCTAAAGAGAAGGGACAATTAAATGAAGATGCCCCTTTTGTTACTTTAAATTGTGCAGATTATAGTAATAATCCTCAGCTCTTACTATCACAGCTTTTTGGATATGTAAAGGGAGCCTTTACTGGAGCTAATAAAGATTATTCTGGGCTTGTTGAGTCTGCAGATAATGGAATATTATTTTTAGATGAAGTACATAGATTACCGCCAGAGGGACAAGAAACTTTATTTTATCTAATGGATAAAGGAGTCTTTTCTCCGGTAGGATCAACGGAGAGAAAGCATGTAGATGTTCTTATTATTTGTGCAACTACGGCTAGGAAAGAGGATTCATTATTAGATACCTTCACAAGAAGAATTCCTATGTCTATAAAGATACCTTCATTAAAGGAGAGAAGTAAAAAAGAGCGATTTAAAATAGCTCAAGCTTTTATTGAGGAAGAGGCTAGTAGGATAAAGAAAGAAATAGTTGTTAACAATGCTGTTTTAAAAAATCTTTTAAACTATGAGTGCTTAGGGAATATAGGTCAACTAAAAAGTGATATAAAGCTAATATGTGCTAATGCTTTTTTAGATGCTATTCATTTAAATAGAGATAAGGTTGAAATTGAGGTTATACACCTTCCAGATCATATAAGAAAGTATGGTATTTATGAAAATGATTTCGAAAGTGAGATAGAAGTTATAGTAGGAAAAAGTGATTTTTTAGTCTTCACTGGTGATGGAGGAGGAAAGATAGGCCATTCTAAAAATAAGATTAAGTATGAGTCTTTTTATGACAAGATAGAAAAAAGATTAAAGGATTTAAGTACAAGATATGATAATCAGGATGATATTGATACAATCATTAGGTTTGAAATTAATGGACAATTTAAAAATTATATAGAGGGTGTAAACAATAATATTGAACTTGAAAAAGTAGTTAGTAAGAAAAGTATTATGTATATGGAAACTCTATTAGCATTGGCTGAAAAGGAGCTATGCAAAAAGTTTTCTAAAAAAGTCTTTTATGGACTTTGCATGCACTTTGATTCAAGCATAAAAAGACTGGGTGAAAATAAAACCGTAGTAAATAAGAACCTTCTTAATGTAATAGAAAATCACCATAGGGAGTTTGAGTTAGTTAGAAACTTTATAAAAGGAATTGAAGGAGAGTTAGAGGTTAGGGTGCCTCTTGATGAGATAGCCTTTATAGCGATGTTCTTATGTATAGATGCAATTGAGAGCGATCTTAAGAACCAATTACCTAAGGTAATAATAAGCATGCATGGAAAGAGTACAGCATCATCTATGGCGGAAACTGTGAATTCTTTATTAGGAATAGATACTGTACAAGCTTATGATATGGAGCTTGATAAAGATTCGAGAACTTGCTATGAGGAATTAAAGGAAGTAGTAAGGAAGAATAGTAATGATGCTGGAGTTCTATTATTAGTAGATATGGGATCATTAATTATGTTTGGTGATTTAATTGGAGAGGAACTTTTAGTTAAGGTAAGGGTAATAGATTGTGTAACAACAATTACAGCCTTAGAGGTTGCAAGACATGCTGAGTTTGAAAGAGATATTGATGTTATATATAATTCTATTTTAAATAAGCAAAGAATGACCTTAATGGGTAATAGGTATAAGGATGAAACTAAAACTAAGAAAGAAAATATAATTATTGCAGCTTGTACTACTGGCGAAGGAAGTGCTAAAAAGATTAAGAAATTAATAGAGGATAATATAAATATTTCAGGAACCAATACTGAAATAATTACAGCAGCAATTACAAGTCATGAAAACATAAGCAATATTATAGGTAAGCTAGGCAAGGATAAAAATATAATAGCTGTTGTAGGAAGTATTGATCCAATGTTATATGGTGTACCATTCATATCTATAACAGATTTAATTATGCTAAATAAATATGGTGAACTTGAGAAGATGATAAAAACAACTGTAGTACAGAAAAAAGTTGAGGAAAATGAAGATTTAAATTTAATAATTGAGCAGGTATTTAATAAGCTAAAAGATAAAATTAATGGCTTTAATATAAATATATTTAAAAAGGACTTTGGAGTTTTTAAGAGATGGATAGAAAGTGAATTAAGCTATCAGTTTGATAAGGATACATTAATAGCTGTAGTATTCCACTTGTTAGCAACAACAGAGAATTTAGTTTTAAAAAGGAAGTGTAAGGAGCATAAAAATAAAGAGTATCTATTGATTTATTATGCAAATGAAATAAAGCAGATTAAGTATGCACTTAAGAATATAGAGGATGACTTAGAAGTTGAGTTCAAATTAGATGAGCTTTGCTATATACTTACCATACTGTATAAATTATAG
PROTEIN sequence
Length: 916
MTRDNRYEEIYHFILETTKLQRENNERIGVTTNEVAEGIGIKRTNASSELNKLVRDGLIKKEEGRPVVYKCIEDDEEVEVISRNEVDAFNKFIGCEGSLKKPIKQAKAAISYPPRGLHTLLLGPTGVGKTMFAEKMYEYAKEKGQLNEDAPFVTLNCADYSNNPQLLLSQLFGYVKGAFTGANKDYSGLVESADNGILFLDEVHRLPPEGQETLFYLMDKGVFSPVGSTERKHVDVLIICATTARKEDSLLDTFTRRIPMSIKIPSLKERSKKERFKIAQAFIEEEASRIKKEIVVNNAVLKNLLNYECLGNIGQLKSDIKLICANAFLDAIHLNRDKVEIEVIHLPDHIRKYGIYENDFESEIEVIVGKSDFLVFTGDGGGKIGHSKNKIKYESFYDKIEKRLKDLSTRYDNQDDIDTIIRFEINGQFKNYIEGVNNNIELEKVVSKKSIMYMETLLALAEKELCKKFSKKVFYGLCMHFDSSIKRLGENKTVVNKNLLNVIENHHREFELVRNFIKGIEGELEVRVPLDEIAFIAMFLCIDAIESDLKNQLPKVIISMHGKSTASSMAETVNSLLGIDTVQAYDMELDKDSRTCYEELKEVVRKNSNDAGVLLLVDMGSLIMFGDLIGEELLVKVRVIDCVTTITALEVARHAEFERDIDVIYNSILNKQRMTLMGNRYKDETKTKKENIIIAACTTGEGSAKKIKKLIEDNINISGTNTEIITAAITSHENISNIIGKLGKDKNIIAVVGSIDPMLYGVPFISITDLIMLNKYGELEKMIKTTVVQKKVEENEDLNLIIEQVFNKLKDKINGFNINIFKKDFGVFKRWIESELSYQFDKDTLIAVVFHLLATTENLVLKRKCKEHKNKEYLLIYYANEIKQIKYALKNIEDDLEVEFKLDELCYILTILYKL*