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NECEvent2014_6_5_scaffold_175_13

Organism: NECEvent2014_6_5_Citrobacter_freundii-rel_52_24_partial

partial RP 18 / 55 MC: 3 BSCG 19 / 51 ASCG 9 / 38 MC: 2
Location: 9975..10823

Top 3 Functional Annotations

Value Algorithm Source
HTH-type transcriptional activator RhaS {ECO:0000256|HAMAP-Rule:MF_01534, ECO:0000256|SAAS:SAAS00011458}; L-rhamnose operon regulatory protein RhaS {ECO:0000256|HAMAP-Rule:MF_01534}; TaxID=546 species similarity UNIPROT
DB: UniProtKB
  • Identity: 99.6
  • Coverage: 282.0
  • Bit_score: 582
  • Evalue 3.10e-163
AraC family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 97.5
  • Coverage: 282.0
  • Bit_score: 573
  • Evalue 3.80e-161

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Taxonomy

Citrobacter freundii → Citrobacter → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 849
ATGACGATATTGCATTGCGTGGATTTTTTTCCGACAGGTAAAGCGCCAGTGGCTATTGAACCGCGGCTTCCTCAACCTGCGTTTCCAGAACATCATCATGATTTTCATGAAATTGTGGTGGTCGAACATGGAACGGGGATCCATGTGTTCAACGGACAGCCTTACACCATCAGCGGCGGTACGGTGTGTTTCGTTCGCGATCATGACCGGCATTTATATGAACATACTGACAATCTGTGCCTGACCAATGTGTTGTATCGCTCCCCGGATGCGTTTCAATTTCTGGCTGGGCTGAATCAGCTTTTACCTCAGGAACAGAATGGGCAGTATCCTTCGCACTGGCGGGTGAATCAGGGTGTGTTGCAGCAGGTTCGACAACTGGTGGGGCAAATGGAAGCGCTCGGTGAGGGGATGGATACACCAACGGCGGCAAATCGCGAGATCCTGTTTATGCAGCTGCTGGTGCTGCTGCGTAAAAGCAGCCTGATGGAAGCAGCGACCGATAACGACGCGCGGCTTAACCTCCTGATGGCGTGGCTGGAAGATAACTTTGCCGACGAGGTGTGTTGGGAGGCGCTGGCCGAGAAGTTTTCCCTCTCTTTGCGTACTCTTCATCGCCAGCTCAAACAGCAAACCGGATTGACGCCGCAGCGCTACCTTAACCGCTTGCGGCTGATCAAGGCTCGGCATCTGCTTCGTCACAGTGATGATAGCGTGACAGACATCGCTTATCTCTGCGGATTCGGCGACAGTAACCACTTTTCGACGCTTTTTCGCCGTGAGTTCAAGTGGTCGCCACGCGATATTCGTCAGGGGCGCGATCTCATGGCGGGAAGCAGCCTGCAGTAA
PROTEIN sequence
Length: 283
MTILHCVDFFPTGKAPVAIEPRLPQPAFPEHHHDFHEIVVVEHGTGIHVFNGQPYTISGGTVCFVRDHDRHLYEHTDNLCLTNVLYRSPDAFQFLAGLNQLLPQEQNGQYPSHWRVNQGVLQQVRQLVGQMEALGEGMDTPTAANREILFMQLLVLLRKSSLMEAATDNDARLNLLMAWLEDNFADEVCWEALAEKFSLSLRTLHRQLKQQTGLTPQRYLNRLRLIKARHLLRHSDDSVTDIAYLCGFGDSNHFSTLFRREFKWSPRDIRQGRDLMAGSSLQ*