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NECEvent2014_6_5_scaffold_175_14

Organism: NECEvent2014_6_5_Citrobacter_freundii-rel_52_24_partial

partial RP 18 / 55 MC: 3 BSCG 19 / 51 ASCG 9 / 38 MC: 2
Location: 10981..11829

Top 3 Functional Annotations

Value Algorithm Source
HTH-type transcriptional activator RhaR {ECO:0000256|HAMAP-Rule:MF_01533}; L-rhamnose operon transcriptional activator RhaR {ECO:0000256|HAMAP-Rule:MF_01533}; TaxID=1114921 species="Bacteria; Proteoba similarity UNIPROT
DB: UniProtKB
  • Identity: 97.5
  • Coverage: 282.0
  • Bit_score: 564
  • Evalue 6.70e-158
rhaR; L-rhamnose operon transcriptional activator similarity KEGG
DB: KEGG
  • Identity: 85.7
  • Coverage: 280.0
  • Bit_score: 494
  • Evalue 1.70e-137

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Taxonomy

Citrobacter werkmanii → Citrobacter → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 849
ATGGCGGATCATCTGATCCTTCTGAAATCAGACTTTTTTGCGCATGAACAGCAGGCTGTCGCCGTAGCCGATCGTTATCCGCAGGATGTCTTTGCTGAGCATACCCATGAATTTTGCGAGCTGGTCCTGGTCTGGCGCGGCAATGGTCTGCATGTCCTTAACGATCGCCCGTACCGGATAACCCGTGGCGATCTGTTTTACATTCGCGCTGAAGACAAACATTCCTACACTTCCGTAAACGACCTTGTTTTGCAAAATATCATCTACTGCCCGGAGCGGTTGACGCTGAATGTTGACTGGCAAGGGGCGATCCCCGGATTTAACGGTGTGCCGCGGCAGGCGCACTGGCGACTCGGCAGCGTTGGCATGACGCAGGCCCGGCAGGTGATAAGCCAGCTTGAGCATGAAAGTAATCAGCGCGATGCGCAGGCTTTTAACATGGCGGAACTGCTATTCGGGCAACTGGTGACGCTCCTTAAACGCCATCGTTACGCCACGGATACGCTCCCGGCAACGTCGAGTGAAACGCTGCTGGATAAACTCATTACCGCGTTAGCTGGGAGTCATGAGCATGCGTTCGAACTGGATAAGTTTTGTGAACGCGAACAGTGCAGCGAGCGCGTTTTGCGCCAGCAGTTTCGCAGCCAGACCGGGATGACCATCAACCAGTATCTCCGCCAGGTGCGGGTCTGCCATGCGCAGTATCTTCTCAAGCATAGTCGGTTGATGATTAGTGAGATTTCCATGCGCTGCGGCTTTGAGGACAGTAACTACTTTTCGGTGGTGTTCACGCGCGAAACCGGGATGACGCCCAGCCAGTGGCGTCATCTCAGCAACCAACATGCTTAG
PROTEIN sequence
Length: 283
MADHLILLKSDFFAHEQQAVAVADRYPQDVFAEHTHEFCELVLVWRGNGLHVLNDRPYRITRGDLFYIRAEDKHSYTSVNDLVLQNIIYCPERLTLNVDWQGAIPGFNGVPRQAHWRLGSVGMTQARQVISQLEHESNQRDAQAFNMAELLFGQLVTLLKRHRYATDTLPATSSETLLDKLITALAGSHEHAFELDKFCEREQCSERVLRQQFRSQTGMTINQYLRQVRVCHAQYLLKHSRLMISEISMRCGFEDSNYFSVVFTRETGMTPSQWRHLSNQHA*