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NECEvent2014_6_5_scaffold_354_14

Organism: NECEvent2014_6_5_Citrobacter_freundii-rel_52_24_partial

partial RP 18 / 55 MC: 3 BSCG 19 / 51 ASCG 9 / 38 MC: 2
Location: 22020..23429

Top 3 Functional Annotations

Value Algorithm Source
Type I secretion outer membrane , TolC family protein {ECO:0000313|EMBL:KEL78391.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escher similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 469.0
  • Bit_score: 904
  • Evalue 4.50e-260
type I secretion protein TolC similarity KEGG
DB: KEGG
  • Identity: 96.6
  • Coverage: 469.0
  • Bit_score: 879
  • Evalue 5.40e-253

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Taxonomy

Escherichia coli → Escherichia → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1410
ATGAGAAATGTCGCGCCTGTTGCCTTACTGCTGGCATTAACGCTCTGTACCCTGCGGGTGAATGCCGAAGATGAACCGCAAATTATTACGCCGGAAGGACTGGCCACTAGCCAGATGCTTCCCTCGCTGGACGGCGCGGTTGCCGATCTGCCGCTAAGTGCCGCCGCTCCCGGTAGCCTGACGCTCAACGACGCGGTGAGTCGTGCCGTGAGCTGGCATCCTTCTATTCGTGAATCCATCGGCAAACTGCTCTCACAAAACGAGCAAATCGACGTGGCGAAGTCAAAATATTACCCGCAGGTTTCTGCCGGAATGAACAACGGTTACAGCAATACCTACACCGACCACGGCTTTAGCCCGGCGCTGGTGATTTCAGTATCGCAAATGCTGTACGACTTCGGCAAAGTAGCAAGCCAGGTCCGCGCCGAGACCGCCGGAGCCGCGCAACAGCAGGCGAATGTGTTACTCAGTATTGATACCATCGCCCACGCCACCGCCAACGCAATAGTCCAGGTGCAGACGTGGCAGCAAATGGTGGACGCCGCCGAAGAGCAGCTCACCGCCTTAAACGGCATTGGTCGGCTGACCCGTCAACGCAATGATGAAGGGGCAACCTCGCTGTCAGACGTGGTGCAAACCGATGCGCGTATCGAGTCTGCACGTTCTCAGTTGGCGCAGTATCAGGCCAATCTCGACAGCAGCAAGGCAACGCTGATGAGCTTCCTCGGCTGGAACTCGCTTAACGGCATCAGCAATGAATTCCCGGTCAAACTGGACAGCAGTTGTGATGTGGTCAAACCGGACGATAAACTGGTTCCCGCGGTCCTGGCGGCCTGGGCACAAGCGAATGTAGCGCAGGCAAATCTCGACTACGCCAACGCGCAGATGACGCCCACCATCTCTCTGGAACCGTCGGTTCAGCACTATCTCAACGACAAATACCCCAGCCATGAGGTACTCGACAAAACCCAGTATTCTGCATGGGTAAAAGTTGAAATGCCGCTGTATCAGGGGGGCGGACTCACCGCCAGACGCAACGCCGCCAGCCATGCGGTAGAATCTGCACAATATTCCATCCAGCGCACCCGACTCGAAGTACGGCAGAAATTACTGGAGTCCCGCAGCCAGGCGATGAGCCTCGCCACCGCCCTGCAGATTCTGCGTCGCCAACAGCGGCTGAGCGAACAAACGCGCGAGCTTTATCAACAGCAATATCTGGACCTTGGCTCGCGCCCGCTGCTCGACGTGCTTAACGCCGAGCAAGAGGTGTATCAGGCCCGTTTTGCTGAACTCCAGACTCAAAACCAACTGCGCCAGCTCCAGTTGAACTGTCTCTATAACACCGGCTCGCTTCGCCAGGCGTTCGCCTTAAATAATCGCAGCATTCAATCGGTGGAGATCAAGCTATGA
PROTEIN sequence
Length: 470
MRNVAPVALLLALTLCTLRVNAEDEPQIITPEGLATSQMLPSLDGAVADLPLSAAAPGSLTLNDAVSRAVSWHPSIRESIGKLLSQNEQIDVAKSKYYPQVSAGMNNGYSNTYTDHGFSPALVISVSQMLYDFGKVASQVRAETAGAAQQQANVLLSIDTIAHATANAIVQVQTWQQMVDAAEEQLTALNGIGRLTRQRNDEGATSLSDVVQTDARIESARSQLAQYQANLDSSKATLMSFLGWNSLNGISNEFPVKLDSSCDVVKPDDKLVPAVLAAWAQANVAQANLDYANAQMTPTISLEPSVQHYLNDKYPSHEVLDKTQYSAWVKVEMPLYQGGGLTARRNAASHAVESAQYSIQRTRLEVRQKLLESRSQAMSLATALQILRRQQRLSEQTRELYQQQYLDLGSRPLLDVLNAEQEVYQARFAELQTQNQLRQLQLNCLYNTGSLRQAFALNNRSIQSVEIKL*