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NECEvent2014_6_5_scaffold_111

Alias: 176_005_scaffold_111

Search features with annotation key words

Displaying items 1-30 of 62 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_6_5_scaffold_111_1
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1..1836)
DNA (1836bp) protein (612aa)
heat-responsive suppressor HrsA (EC:2.7.1.69 2.7.1.-)
PTS system, Fru family, IIC component {ECO:0000313|EMBL:EEH99573.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_4
NECEvent2014_6_5_scaffold_111_2
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1851..2756)
DNA (906bp) protein (302aa)
Tagatose-6-phosphate kinase {ECO:0000256|PIRNR:PIRNR000535}; EC=2.7.1.144 {ECO:0000256|PIRNR:PIRNR000535};; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clost
fruK; fructose-1-phosphate kinase (EC:2.7.1.56)
NECEvent2014_6_5_scaffold_111_3
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2753..3505)
DNA (753bp) protein (251aa)
Uncharacterized protein {ECO:0000313|EMBL:EEH99571.2}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
hypothetical protein
NECEvent2014_6_5_scaffold_111_4
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3669..3812
DNA (144bp) protein (48aa)
Uncharacterized protein {ECO:0000313|EMBL:KJZ86471.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
NECEvent2014_6_5_scaffold_111_5
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3997..4443
DNA (447bp) protein (149aa)
Transcriptional regulator MraZ {ECO:0000256|HAMAP-Rule:MF_01008, ECO:0000256|SAAS:SAAS00217766}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;"
cell division protein MraZ
NECEvent2014_6_5_scaffold_111_6
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4456..5388
DNA (933bp) protein (311aa)
Ribosomal RNA small subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_01007}; EC=2.1.1.199 {ECO:0000256|HAMAP-Rule:MF_01007};; 16S rRNA m(4)C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_0100
rsmH; ribosomal RNA small subunit methyltransferase H (EC:2.1.1.199)
NECEvent2014_6_5_scaffold_111_7
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5428..5934
DNA (507bp) protein (169aa)
Uncharacterized protein {ECO:0000313|EMBL:KJZ86475.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
protein required for the initiation of cell division
NECEvent2014_6_5_scaffold_111_8
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6000..8276
DNA (2277bp) protein (759aa)
Stage V sporulation protein D {ECO:0000313|EMBL:ENZ34286.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;
stage V sporulation protein D
NECEvent2014_6_5_scaffold_111_9
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8466..10808
DNA (2343bp) protein (781aa)
Stage V sporulation protein D {ECO:0000313|EMBL:ENZ34285.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;
stage V sporulation protein D
NECEvent2014_6_5_scaffold_111_10
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11090..12550
DNA (1461bp) protein (487aa)
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase {ECO:0000256|HAMAP-Rule:MF_00208}; EC=6.3.2.13 {ECO:0000256|HAMAP-Rule:MF_00208};; Meso-A2pm-adding enzyme {ECO:0000256|HAMAP-Rule
murE2; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase MurE (EC:6.3.2.13)
NECEvent2014_6_5_scaffold_111_11
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12603..13973
DNA (1371bp) protein (457aa)
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase {ECO:0000256|RuleBase:RU004136}; EC=6.3.2.10 {ECO:0000256|RuleBase:RU004136};; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostr
UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase
NECEvent2014_6_5_scaffold_111_12
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14013..14990
DNA (978bp) protein (326aa)
Phospho-N-acetylmuramoyl-pentapeptide-transferase {ECO:0000256|HAMAP-Rule:MF_00038}; EC=2.7.8.13 {ECO:0000256|HAMAP-Rule:MF_00038};; UDP-MurNAc-pentapeptide phosphotransferase {ECO:0000256|HAMAP-Rule:
mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase MraY (EC:2.7.8.13)
NECEvent2014_6_5_scaffold_111_13
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15015..16154
DNA (1140bp) protein (380aa)
Cell division protein FtsW {ECO:0000313|EMBL:KJZ86435.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
spoVE2; stage V sporulation protein E
NECEvent2014_6_5_scaffold_111_14
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16357..17175
DNA (819bp) protein (273aa)
Uncharacterized protein {ECO:0000313|EMBL:ENZ34280.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
divIB; cell division protein DivIB
NECEvent2014_6_5_scaffold_111_15
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17162..17887
DNA (726bp) protein (242aa)
Division initiation protein {ECO:0000313|EMBL:EEP54510.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. B
hypothetical protein
NECEvent2014_6_5_scaffold_111_16
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17899..18291
DNA (393bp) protein (131aa)
Uncharacterized protein {ECO:0000313|EMBL:ENZ34278.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
NECEvent2014_6_5_scaffold_111_17
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18349..19038
DNA (690bp) protein (230aa)
Uncharacterized protein {ECO:0000313|EMBL:KJZ86467.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
NECEvent2014_6_5_scaffold_111_18
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19130..19795
DNA (666bp) protein (222aa)
Uncharacterized protein {ECO:0000313|EMBL:KJZ86454.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
pyridoxal phosphate enzyme, YggS family
NECEvent2014_6_5_scaffold_111_19
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19807..20265
DNA (459bp) protein (153aa)
Cell division protein SepF {ECO:0000256|HAMAP-Rule:MF_01197}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str
sepF; cell division protein SepF
NECEvent2014_6_5_scaffold_111_20
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20274..20531
DNA (258bp) protein (86aa)
Integral membrane protein YggT, involved in response to extracytoplasmic stress (Osmotic shock) {ECO:0000313|EMBL:KJZ86464.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; C
YGGT family
NECEvent2014_6_5_scaffold_111_21
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20536..21300
DNA (765bp) protein (255aa)
Uncharacterized protein {ECO:0000313|EMBL:KJZ86448.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
RNA-binding S4 domain-containing protein
NECEvent2014_6_5_scaffold_111_22
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21317..21928
DNA (612bp) protein (204aa)
Cell division initiation protein DivIVA {ECO:0000313|EMBL:KJZ86457.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IB
DivIVA family protein
NECEvent2014_6_5_scaffold_111_23
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21935..22087
DNA (153bp) protein (51aa)
Uncharacterized protein; TaxID=1306409 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DKU-01.;"
NECEvent2014_6_5_scaffold_111_24
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22124..23038
DNA (915bp) protein (305aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridiu
ylyB; RNA pseudouridine synthase YlyB (EC:5.4.99.-)
NECEvent2014_6_5_scaffold_111_25
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23065..23613
DNA (549bp) protein (183aa)
pyrR; bifunctional protein PyrR (EC:2.4.2.9)
Bifunctional protein PyrR {ECO:0000256|HAMAP-Rule:MF_01219}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;
NECEvent2014_6_5_scaffold_111_26
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23628..24791
DNA (1164bp) protein (388aa)
ypsC; putative RNA methyltransferase YpsC (EC:2.1.1.-)
N6-adenine-specific DNA methylase {ECO:0000313|EMBL:KJZ86433.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C
NECEvent2014_6_5_scaffold_111_27
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24995..25840
DNA (846bp) protein (282aa)
Transcriptional regulator, RpiR family {ECO:0000313|EMBL:KJZ86443.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBU
RpiR family transcriptional regulator
NECEvent2014_6_5_scaffold_111_28
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25916..27667)
DNA (1752bp) protein (584aa)
Fibronectin/fibrinogen-binding protein {ECO:0000313|EMBL:KJZ86337.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBU
yloA; protein YloA
NECEvent2014_6_5_scaffold_111_29
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27895..28722
DNA (828bp) protein (276aa)
Diaminopimelate epimerase {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028055}; Short=DAP epimerase {ECO:0000256|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00197, ECO:000
dapF; diaminopimelate epimerase DapF (EC:5.1.1.7)
NECEvent2014_6_5_scaffold_111_30
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28783..29790
DNA (1008bp) protein (336aa)
Uncharacterized protein {ECO:0000313|EMBL:ENZ34265.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
Displaying items 1-30 of 62 in total

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