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NECEvent2014_6_5_scaffold_247_11

Organism: NECEvent2014_6_5_Clostridium_butyricum_28_55

near complete RP 52 / 55 MC: 2 BSCG 50 / 51 MC: 4 ASCG 15 / 38 MC: 1
Location: 11192..13441

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; TaxID=1523155 species="Bacteria; Firmicutes; Clostri similarity UNIPROT
DB: UniProtKB
  • Identity: 99.9
  • Coverage: 734.0
  • Bit_score: 1464
  • Evalue 0.0
rnr; ribonuclease R (EC:3.1.13.1) similarity KEGG
DB: KEGG
  • Identity: 82.4
  • Coverage: 727.0
  • Bit_score: 1232
  • Evalue 0.0

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Taxonomy

Clostridium sp. IBUN22A → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 2250
ATGGGAATAAAACAGACATTAGTAAGTTTTATGAAAGAACCTGCATATAGCCCTATGGCACTTGAAGATTTAGTTGCTGTATTTGATATAAAACCTAATGAGTATAGTGCATTTAAAAAAACATTAAGAGTTATGGAACGTGAAGGTCTCATCATGAGAACTAAAAAGGATAGATTTATAATTGCTGATGGTAATAATAATCATATTGAAACAAAAGAAAATTTAGTTATAGGAACATTACAAGCTCATGCAAAAGGATTTGGATTTTTAATTCCTGAAGATGAAAATGAAAAGGATGTATTTTTACCAAGTAATTGTATGAATGGAGCTATTAATGGAGATAAAATCGCTGTTAAGGTTACAAGAGAAGATACAAATACAAAAAAAAGAGAAGGCGAAGTCGTAGAAATACTTGAAAGAAACACAACAACTGTAGTTGGAATTTATGAAGATTCTAAAAGTTTTGGATTTGTTATATCAGAAGATACAAGAATATCAAGAGATATTTATATTCCTAAAAGAGATAGAAATGGTGCACAAGATGGTGATGTTGTTACGGTAAAAATAACAAAATGGCCAGAAGGAAATAGAAAACCAGAGGGTGTTGTAACAGAAGTATTAGGAAGAAAAGGTGATAGAGGAATAGACATCCTTATAGTAATTAAAAAATTAGGACTTCCTGAAGAATTTAATAGTAAAGTATTAAAATATGCAGAGGGTATTTCCGAGGAAATTGACGAAAGTGAATATAAAGGTAGAAGAGATTTAAGAGATGTAAGAATGGTAACAATAGATGGTGAAGACGCTAAGGATTTAGATGATGCTGTATCTATAGAAAAACTACCTAATGGAAATTATAAATTAGGAGTTCACATTGCGGACGTTTCTCACTATGTACGTGAAAATAATCCTCTTGATAAAGAAGCATTTAAAAGAGCAACTTCAGTATATTTAATAGACAGGGTTATTCCAATGCTTCCTAGAAAATTATCTAATGGAATATGTTCATTAAATCCTAAAGTTGATAGACTAACTTTATCATGTATAATGGAAATAGATCATAAAGGAAAAGTTGTTAATCATGAAATAGTTGAATCTGTAATAAGAACTAATGAAAGAATGACATATACAGATGTAACTAAGATTTTAGAAGATAATGATGAAGAGTTAATTAAGAGATACGATTATCTTGTTGATGACTTTAAAACAATGAAAGAGCTTTGTAAAATATTAAGAGCAAAGAGAACCAAAAGGGGAGCTATTGATTTTGAAATAGCTGAAGCTAAAATAATATTAAATGAACTTGGAAAACCAATAGAAATAAAGCCTTATGATAGAGCTATATCTAATAGAATGATTGAAGAATTTATGCTTGTAGCAAATGAAACTGTGGCAGAGCATATGTTCTGGACACATTTACCTTTTGTATATAGAATTCATGAAAATCCTGATGATGAAAAATTAACTAAGTTCAAAGAATTTATTCATAATTTAGGATACAATATTAATTGGACTGAAGAAATAAGACCGAAGACACTTCAAGATATAATAGAAAAGGTAAAGGGTAAGAGTGAAGAAACAGTAGTAAATACTTTATTATTACGTTCAATGATGCAAGCAAGGTATGCACCAGAATGTACTGGTCACTTTGGATTAGCAGCACAATATTATTGTCACTTTACTTCGCCAATAAGAAGATATCCTGATTTACAAATTCACAGAATAATTAAAGAATATCTTCATGGAAAAATAGATGAAAAGAGAGAAAATAAATTAAAGAATATTGTTGGTCACTCAGCAAAACAGTCATCAGAAATGGAAAGAAAAGCTCAAGATGCAGAAAGAGAAGTTGATGATTTAAAGAAAGCTGAATATATGCAGGATAGAATTGGAGAAGAATTTGAAGGTGTTATTTCTTCTGTAACATCATTTGGAGTCTTTGTGGAACTTCCAAGTACAATAGAAGGTTTAGTTCATATTACAGATTTAGATGATGATTACTATATTTATGAAGAAGATCATTTAAGATTAATCGGTGAGAGAACTAAGAAAATCTATAAACTTGGAGATAAAGTACTTGTAGAGTGTGTTCATGTTGATATGCCAAATAAAGAAATATTCTTTAAGATTATTGAAGAACCAAATGAAGAAGAAGTTTCAGTAGAAGAACCTAAAAATAATGAGAGCGAAATTGAAATTAAATGAAAGAGAATGGTTTATGATAGAAAATCTTTAAGAAGCAAAAAATAG
PROTEIN sequence
Length: 750
MGIKQTLVSFMKEPAYSPMALEDLVAVFDIKPNEYSAFKKTLRVMEREGLIMRTKKDRFIIADGNNNHIETKENLVIGTLQAHAKGFGFLIPEDENEKDVFLPSNCMNGAINGDKIAVKVTREDTNTKKREGEVVEILERNTTTVVGIYEDSKSFGFVISEDTRISRDIYIPKRDRNGAQDGDVVTVKITKWPEGNRKPEGVVTEVLGRKGDRGIDILIVIKKLGLPEEFNSKVLKYAEGISEEIDESEYKGRRDLRDVRMVTIDGEDAKDLDDAVSIEKLPNGNYKLGVHIADVSHYVRENNPLDKEAFKRATSVYLIDRVIPMLPRKLSNGICSLNPKVDRLTLSCIMEIDHKGKVVNHEIVESVIRTNERMTYTDVTKILEDNDEELIKRYDYLVDDFKTMKELCKILRAKRTKRGAIDFEIAEAKIILNELGKPIEIKPYDRAISNRMIEEFMLVANETVAEHMFWTHLPFVYRIHENPDDEKLTKFKEFIHNLGYNINWTEEIRPKTLQDIIEKVKGKSEETVVNTLLLRSMMQARYAPECTGHFGLAAQYYCHFTSPIRRYPDLQIHRIIKEYLHGKIDEKRENKLKNIVGHSAKQSSEMERKAQDAEREVDDLKKAEYMQDRIGEEFEGVISSVTSFGVFVELPSTIEGLVHITDLDDDYYIYEEDHLRLIGERTKKIYKLGDKVLVECVHVDMPNKEIFFKIIEEPNEEEVSVEEPKNNESEIEIK*KRMVYDRKSLRSKK*