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NECEvent2014_6_5_scaffold_771_17

Organism: NECEvent2014_6_5_Clostridium_perfringens_28_32

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 MC: 2 ASCG 15 / 38 MC: 1
Location: 11032..11715

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-F factor {ECO:0000313|EMBL:EIA15997.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262. similarity UNIPROT
DB: UniProtKB
  • Identity: 95.6
  • Coverage: 227.0
  • Bit_score: 436
  • Evalue 2.20e-119
RNA polymerase sigma factor, sigma-70 family similarity KEGG
DB: KEGG
  • Identity: 50.5
  • Coverage: 200.0
  • Bit_score: 205
  • Evalue 1.70e-50

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Taxonomy

Clostridium perfringens → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 684
ATGACTAATGAGGAGCATGTTGTATTATATCAGCAAGGAGATAAAAAGGCTTTGGATAAGCTTTTAGAAAATAATGATAAGTTAATATATAAGGTAGCCAGTAAATTCTATTCAGATAAAACGAGTTCTATTGAGTTTGATGATTTGCTTCAGGAGGGGAGAATAGGATTTATATTAGCTTGTAGTAAATATGATATTGAATATATAAAGAAAACTAAGTTTATTACATATGCTTTTTACTGGATCTATCAAAAGATTCATAGATTTATTACTACACATAACACTAATGATGAAATAAGTCTTAATACACCAGTAAGTGAAGAGAATACAGATGAATTAATAAATAGTATAGAGAGCCATAGTAACGAGATAAAGGATAGAGAAGAGGAATTATATCTAAGTGAATTGAGGCTTGAATTAGAGGCTGTTATGGACAAGTATAACACTCTTAATGAAAGAGAAATATTAAAACTATATTATGGTTGGGATACTGATGAGTTAAGCATAGAACAAATAGCTGATATATTTGAAACCTCTTCAAGTGATATAAAAAATACAAAGGCAAGAGCTATAAGAAAGTTAAGAGGTAGTCAATGGTTTAGAATCCAATATCAAAGAAGATATTCAGAAGATATAACCTTTATGAGAGTATTAAGAAATTTAGATTATGGTATAAGTATTTAG
PROTEIN sequence
Length: 228
MTNEEHVVLYQQGDKKALDKLLENNDKLIYKVASKFYSDKTSSIEFDDLLQEGRIGFILACSKYDIEYIKKTKFITYAFYWIYQKIHRFITTHNTNDEISLNTPVSEENTDELINSIESHSNEIKDREEELYLSELRLELEAVMDKYNTLNEREILKLYYGWDTDELSIEQIADIFETSSSDIKNTKARAIRKLRGSQWFRIQYQRRYSEDITFMRVLRNLDYGISI*