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NECEvent2014_6_6_scaffold_945

Alias: 176_006_scaffold_945

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_6_6_scaffold_945_1
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..328
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Clostridium intestinale URNW RepID=U2PYE0_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIY85132.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.
NECEvent2014_6_6_scaffold_945_2
unknown

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350..469
DNA (120bp) protein (40aa)

This feature has no annotations

NECEvent2014_6_6_scaffold_945_3
Caldicellulosiruptor kronotskyensis, Caldicellulosiruptor, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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677..4468
DNA (3792bp) protein (1264aa)
von Willebrand factor type A n=1 Tax=Caldicellulosiruptor kronotskyensis (strain DSM 18902 / VKM B-2412 / 2002) RepID=E4SBS4_CALK2 rbh
von willebrand factor type a
von Willebrand factor type A {ECO:0000313|EMBL:ADQ46197.1}; TaxID=632348 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family III. Incertae Sedis; Caldicell
NECEvent2014_6_6_scaffold_945_4
unknown

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4496..6292
DNA (1797bp) protein (599aa)

This feature has no annotations

NECEvent2014_6_6_scaffold_945_5
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6366..8048)
DNA (1683bp) protein (561aa)
GH3 auxin-responsive promoter n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QHP3_9CLOT
GH3 auxin-responsive promoter {ECO:0000313|EMBL:EKY27534.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.
plant auxin-responsive GH3-like protein
NECEvent2014_6_6_scaffold_945_6
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8586..9941
DNA (1356bp) protein (452aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HFA3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH97163.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
trkA; potassium transporter peripheral membrane component
NECEvent2014_6_6_scaffold_945_7
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9947..11395
DNA (1449bp) protein (483aa)
TrkH family potassium uptake protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HD06_9CLOT
TrkH family potassium uptake protein {ECO:0000313|EMBL:EEH97164.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43
trkH; Trk system potassium uptake protein TrkH
NECEvent2014_6_6_scaffold_945_8
[Clostridium] hylemonae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11447..12193)
DNA (747bp) protein (249aa)
4Fe-4S binding domain protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0BW46_9CLOT rbh
4Fe-4S binding domain protein {ECO:0000313|EMBL:EEG75885.1}; TaxID=553973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] hylemonae DSM 15053.;"
putative polyferredoxin
NECEvent2014_6_6_scaffold_945_9
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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12362..13138
DNA (777bp) protein (259aa)
4Fe-4S binding domain protein n=1 Tax=Clostridium sordellii VPI 9048 RepID=T0CJS7_CLOSO rbh
Nitroreductase {ECO:0000313|EMBL:CEQ30523.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
4fe-4s binding domain protein
NECEvent2014_6_6_scaffold_945_10
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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13154..13483
DNA (330bp) protein (110aa)
Transcriptional regulator, ArsR family n=8 Tax=Clostridium difficile RepID=U3VMR0_CLODI
Transcriptional regulator, ArsR family {ECO:0000313|EMBL:EHJ32507.1}; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclo
ArsR family transcriptional regulator
NECEvent2014_6_6_scaffold_945_11
Coprococcus sp. HPP0048, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13569..13775)
DNA (207bp) protein (69aa)
Uncharacterized protein n=1 Tax=Coprococcus sp. HPP0048 RepID=S2Z5B2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPD65157.1}; TaxID=1078091 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0048.;"
NADH:flavin oxidoreductase
Displaying 11 items

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