ggKbase home page

NECEvent2014_6_7_scaffold_5960_1

Organism: NECEvent2014_6_7_Peptoclostridium_difficile_29_7_partial

partial RP 33 / 55 BSCG 30 / 51 ASCG 7 / 38 MC: 3
Location: 2..148

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, MarR family n=5 Tax=Clostridium difficile RepID=Q187W6_CLOD6 similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 48.0
  • Bit_score: 107
  • Evalue 3.60e-21
effR; Transcriptional regulator, MarR family similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 48.0
  • Bit_score: 107
  • Evalue 1.00e-21
EffR {ECO:0000313|EMBL:AAK77648.1}; Transcriptional regulator {ECO:0000313|EMBL:CKH18846.1}; Transcriptional regulator, MarR family {ECO:0000313|EMBL:CEJ98589.1}; TaxID=1496 species="Bacteria; Firmicu similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 48.0
  • Bit_score: 107
  • Evalue 5.00e-21

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Peptoclostridium difficile → Peptoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 147
TTAATGTCTATGCGTGAAAGAGCTTTTGGACATATGAGACCACCCAAAGATATACCGGGAGCTGAACGCTTTTCTGAAAACTATAACGGATATGTTCCAGATAGAGACGGATTTCAGCCAAGAAACTTTAGACCAGATATCAAATAA
PROTEIN sequence
Length: 49
LMSMRERAFGHMRPPKDIPGAERFSENYNGYVPDRDGFQPRNFRPDIK*