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NECEvent2014_7_1_scaffold_306

Alias: 177_001_scaffold_306

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_7_1_scaffold_306_1
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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2..2494
DNA (2493bp) protein (831aa)
Leucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00049}; EC=6.1.1.4 {ECO:0000256|HAMAP-Rule:MF_00049};; Leucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00049}; TaxID=35703 species="Bacteria; Proteoba
Leucine--tRNA ligase n=1 Tax=Citrobacter sp. KTE32 RepID=R8VIF9_9ENTR rbh
leuS; leucyl-tRNA synthetase
NECEvent2014_7_1_scaffold_306_2
Citrobacter sp. KTE151, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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2509..3102
DNA (594bp) protein (198aa)
LPS-assembly lipoprotein lptE n=3 Tax=Citrobacter RepID=R8VJ97_9ENTR rbh
LPS-assembly lipoprotein LptE {ECO:0000256|HAMAP-Rule:MF_01186, ECO:0000256|SAAS:SAAS00074334}; Flags: Precursor;; TaxID=1169322 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterial
LPS biosynthesis protein
NECEvent2014_7_1_scaffold_306_3
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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3102..4133
DNA (1032bp) protein (344aa)
DNA polymerase III subunit delta n=1 Tax=Citrobacter freundii RepID=UPI0002E34371 rbh
DNA polymerase III subunit delta {ECO:0000313|EMBL:ETX65165.1}; TaxID=1400137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter fr
holA; DNA polymerase III subunit delta
NECEvent2014_7_1_scaffold_306_4
Citrobacter sp. KTE151, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4126..4776
DNA (651bp) protein (217aa)
Probable nicotinate-nucleotide adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00244}; EC=2.7.7.18 {ECO:0000256|HAMAP-Rule:MF_00244};; Deamido-NAD(+) diphosphorylase {ECO:0000256|HAMAP-Rule:MF_00244};
Probable nicotinate-nucleotide adenylyltransferase n=2 Tax=Citrobacter RepID=R8VNU6_9ENTR rbh
nicotinate-nucleotide adenylyltransferase
NECEvent2014_7_1_scaffold_306_5
Citrobacter sp. KTE151, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4751..5845)
DNA (1095bp) protein (365aa)
threonine-phosphate decarboxylase (EC:4.1.1.81)
Threonine-phosphate decarboxylase n=1 Tax=Citrobacter sp. KTE151 RepID=R8X4P4_9ENTR rbh
Threonine-phosphate decarboxylase {ECO:0000313|EMBL:EOQ50282.1}; TaxID=1169322 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Cit
NECEvent2014_7_1_scaffold_306_6
Citrobacter sp. KTE151, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5942..6553
DNA (612bp) protein (204aa)
Alpha-ribazole phosphatase n=1 Tax=Citrobacter sp. KTE151 RepID=R8X0E3_9ENTR rbh
Alpha-ribazole phosphatase {ECO:0000313|EMBL:EOQ50281.1}; TaxID=1169322 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacte
alpha-ribazole phosphatase
NECEvent2014_7_1_scaffold_306_7
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6808..7125
DNA (318bp) protein (106aa)
Ribosomal silencing factor RsfS n=12 Tax=Enterobacteriaceae RepID=C1M8U2_9ENTR
ribosome-associated protein
Ribosomal silencing factor RsfS {ECO:0000256|HAMAP-Rule:MF_01477}; TaxID=1439318 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter
NECEvent2014_7_1_scaffold_306_8
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7129..7596
DNA (468bp) protein (156aa)
Ribosomal RNA large subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_00658, ECO:0000256|SAAS:SAAS00039794}; EC=2.1.1.177 {ECO:0000256|HAMAP-Rule:MF_00658, ECO:0000256|SAAS:SAAS00039776};; 23S rR
Ribosomal RNA large subunit methyltransferase H n=16 Tax=Enterobacteriaceae RepID=RLMH_CITK8 rbh
rRNA large subunit methyltransferase
NECEvent2014_7_1_scaffold_306_9
Citrobacter sp. KTE151, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7627..9528
DNA (1902bp) protein (634aa)
Penicillin-binding protein 2 n=2 Tax=Citrobacter RepID=R8VNU2_9ENTR rbh
Penicillin-binding protein 2 {ECO:0000313|EMBL:EOQ50278.1}; TaxID=1169322 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobac
penicillin-binding protein 2 rbh
NECEvent2014_7_1_scaffold_306_10
Citrobacter youngae, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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9531..10643
DNA (1113bp) protein (371aa)
Rod shape-determining protein RodA n=3 Tax=Citrobacter RepID=D4BCH6_9ENTR rbh
cell wall shape-determining protein
Rod shape-determining protein RodA {ECO:0000313|EMBL:EFE08312.1}; TaxID=500640 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter f
NECEvent2014_7_1_scaffold_306_11
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10654..11757
DNA (1104bp) protein (368aa)
Rare lipoprotein A n=1 Tax=Citrobacter sp. KTE32 RepID=R8VIF1_9ENTR rbh
Lipoprotein {ECO:0000313|EMBL:KKC65392.1}; TaxID=35703 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus.;"
lipoprotein rbh
NECEvent2014_7_1_scaffold_306_12
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11900..13111
DNA (1212bp) protein (404aa)
D-alanyl-D-alanine carboxypeptidase (EC:3.4.16.4)
D-alanyl-D-alanine carboxypeptidase dacA n=10 Tax=Citrobacter RepID=C1M8T7_9ENTR rbh
D-alanyl-D-alanine carboxypeptidase dacA {ECO:0000313|EMBL:KDF21024.1}; TaxID=1439318 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrob
NECEvent2014_7_1_scaffold_306_13
Citrobacter youngae, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13218..13481
DNA (264bp) protein (88aa)
UPF0250 protein CSAG_00426 n=12 Tax=Enterobacteriaceae RepID=C1M8T6_9ENTR
hypothetical protein
UPF0250 protein CIT292_08193 {ECO:0000256|HAMAP-Rule:MF_00659}; TaxID=500640 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter fre
NECEvent2014_7_1_scaffold_306_14
Citrobacter sp. KTE151, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13578..14219
DNA (642bp) protein (214aa)
Octanoyltransferase {ECO:0000256|HAMAP-Rule:MF_00013, ECO:0000256|PIRNR:PIRNR016262}; EC=2.3.1.181 {ECO:0000256|HAMAP-Rule:MF_00013, ECO:0000256|PIRNR:PIRNR016262};; Lipoate-protein ligase B {ECO:0000
lipoate--protein ligase (EC:2.3.1.181)
Octanoyltransferase n=1 Tax=Citrobacter sp. KTE151 RepID=R8WZH5_9ENTR rbh
NECEvent2014_7_1_scaffold_306_15
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14426..15391
DNA (966bp) protein (322aa)
Lipoyl synthase {ECO:0000256|HAMAP-Rule:MF_00206}; EC=2.8.1.8 {ECO:0000256|HAMAP-Rule:MF_00206};; Lip-syn {ECO:0000256|HAMAP-Rule:MF_00206}; Lipoate synthase {ECO:0000256|HAMAP-Rule:MF_00206}; Lipoic
lipoyl synthase (EC:2.8.1.8)
Lipoyl synthase n=11 Tax=Citrobacter RepID=C1M8T4_9ENTR rbh
NECEvent2014_7_1_scaffold_306_16
Citrobacter sp. KTE151, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15469..15672)
DNA (204bp) protein (68aa)
Probable Sec-independent protein translocase protein TatE n=2 Tax=Citrobacter RepID=R8VIE7_9ENTR
Probable Sec-independent protein translocase protein TatE {ECO:0000256|HAMAP-Rule:MF_00903}; TaxID=1169322 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae
tatE; preprotein translocase subunit SecE
NECEvent2014_7_1_scaffold_306_17
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15801..16589)
DNA (789bp) protein (263aa)
hydrolase n=1 Tax=Citrobacter freundii RepID=UPI000306E9F3 rbh
Hydrolase {ECO:0000313|EMBL:KKC65386.1}; TaxID=35703 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus.;"
hydrolase
NECEvent2014_7_1_scaffold_306_18
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16680..17063
DNA (384bp) protein (128aa)
Putative fluoride ion transporter CrcB n=6 Tax=Citrobacter RepID=G9SGT4_CITFR
camphor resistance protein CrcB
Putative fluoride ion transporter CrcB {ECO:0000256|HAMAP-Rule:MF_00454}; TaxID=35703 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" sour
NECEvent2014_7_1_scaffold_306_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17115..17336)
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) RepID=A8AJI0_CITK8
cold-shock DNA-binding domain-containing protein
Cold shock protein {ECO:0000313|EMBL:EGI10143.1}; TaxID=656414 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli H7
Displaying 19 items

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