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NECEvent2014_7_3_scaffold_16

Alias: 177_003_scaffold_16

Search features with annotation key words

Displaying items 1-30 of 71 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_7_3_scaffold_16_1
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1..270)
DNA (270bp) protein (90aa)
GalD n=2 Tax=Bifidobacterium breve RepID=F9Y1U4_BIFBU
Permease protein of ABC transporter system for sugars, galactan metabolism
Permease protein of ABC transporter system for sugars, galactan metabolism {ECO:0000313|EMBL:AHJ20621.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifido
NECEvent2014_7_3_scaffold_16_2
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(508..1857)
DNA (1350bp) protein (450aa)
Uncharacterized protein n=2 Tax=Bifidobacterium breve RepID=S3AK78_BIFBR rbh
ABC transporter, solute-binding protein {ECO:0000313|EMBL:ERI87442.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacteriu
family 1 extracellular solute-binding protein of ABC transporter system
NECEvent2014_7_3_scaffold_16_3
unknown

Not on your lists

comp(1935..2171)
DNA (237bp) protein (79aa)

This feature has no annotations

NECEvent2014_7_3_scaffold_16_4
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2996..7057)
DNA (4062bp) protein (1354aa)
ABC transporter, ATP-binding protein n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2E4W4_BIFBR rbh
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:ERI87446.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium b
ATP-binding and permeaase modules of ABC transporter system rbh
NECEvent2014_7_3_scaffold_16_5
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7787..8143)
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2CSA0_BIFBR
Uncharacterized protein {ECO:0000313|EMBL:ERI87405.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.
Glucose/fructose transport protein
NECEvent2014_7_3_scaffold_16_6
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8177..8434)
DNA (258bp) protein (86aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2E4T3_BIFBR
Uncharacterized protein {ECO:0000313|EMBL:ERI87406.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.
Glucose/fructose transport protein
NECEvent2014_7_3_scaffold_16_7
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8858..10681
DNA (1824bp) protein (608aa)
AMP-binding enzyme n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2E063_BIFBR rbh
AMP-binding enzyme {ECO:0000313|EMBL:ERI87407.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
Long-chain-fatty-acid--CoA ligase
NECEvent2014_7_3_scaffold_16_8
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11248..12363)
DNA (1116bp) protein (372aa)
Transcriptional regulator, LacI family n=3 Tax=Bifidobacterium breve RepID=F9Y1T9_BIFBU rbh
Transcriptional regulator, LacI family
Transcriptional regulator, LacI family {ECO:0000313|EMBL:ABE95111.1}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium
NECEvent2014_7_3_scaffold_16_9
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12525..13385)
DNA (861bp) protein (287aa)
Ribonuclease {ECO:0000256|RuleBase:RU003515}; EC=3.1.26.- {ECO:0000256|RuleBase:RU003515};; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" s
Ribonuclease n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2E4T7_BIFBR rbh
rnhB; Ribonuclease HII
NECEvent2014_7_3_scaffold_16_10
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13410..14333)
DNA (924bp) protein (308aa)
Signal peptidase I {ECO:0000256|RuleBase:RU362042}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU362042};; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacteri
Signal peptidase I n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2E067_BIFBR rbh
Signal peptidase I
NECEvent2014_7_3_scaffold_16_11
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(14502..14951)
DNA (450bp) protein (150aa)
50S ribosomal protein L19 n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2CTM5_BIFBR
LSU ribosomal protein L19P
50S ribosomal protein L19 {ECO:0000256|HAMAP-Rule:MF_00402, ECO:0000256|RuleBase:RU000559}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" s
NECEvent2014_7_3_scaffold_16_12
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15238..15753)
DNA (516bp) protein (172aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve HPH0326 RepID=S3AK70_BIFBR rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EPD76729.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.
NECEvent2014_7_3_scaffold_16_13
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15867..17657
DNA (1791bp) protein (597aa)
ABC transporter, permease protein n=1 Tax=Bifidobacterium breve DSM 20213 = JCM 1192 RepID=D4BMK5_BIFBR rbh
Permease protein of ABC transporter system
Permease protein of ABC transporter system {ECO:0000313|EMBL:AHJ18689.1}; TaxID=1385940 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacte
NECEvent2014_7_3_scaffold_16_14
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17787..19205
DNA (1419bp) protein (473aa)
ABC transporter, ATP-binding protein n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2E4U1_BIFBR rbh
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:ERI87416.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium b
ATP-binding protein of ABC transporter system rbh
NECEvent2014_7_3_scaffold_16_15
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19716..21416)
DNA (1701bp) protein (567aa)
Glucose-6-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612}; Short=GPI {ECO:0000256|HAMAP-Rule:MF_00473};; EC=5.3.1.9 {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|R
Glucose-6-phosphate isomerase n=5 Tax=Bifidobacterium breve RepID=F6C7G8_BIFBA rbh
Glucose-6-phosphate isomerase rbh
NECEvent2014_7_3_scaffold_16_trna_1
unknown

Not on your lists

21775..21847
DNA (73bp)
transferRNA
NECEvent2014_7_3_scaffold_16_trna_2
unknown

Not on your lists

21942..22022
DNA (81bp)
transferRNA
NECEvent2014_7_3_scaffold_16_16
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22291..23292
DNA (1002bp) protein (334aa)
Uncharacterized protein n=2 Tax=Bifidobacterium breve RepID=S2ZQX6_BIFBR rbh
putative membrane spanning protein with auxin efflux carrier domain
Transporter, auxin efflux carrier family protein {ECO:0000313|EMBL:ERI87418.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifid
NECEvent2014_7_3_scaffold_16_17
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23418..24191)
DNA (774bp) protein (258aa)
Non-canonical purine NTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405, ECO:0000256|SAAS:SAAS00020486}; EC=3.6.1.19 {ECO:0000256|HAMAP-Rule:MF_01405, ECO:0000256|SAAS:SAAS00020468};; Non-standard p
Non-canonical purine NTP pyrophosphatase n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2CAA2_BIFBR rbh
Hypothetical protein with HAM1 family domain
NECEvent2014_7_3_scaffold_16_18
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24313..25089)
DNA (777bp) protein (259aa)
rph; Ribonuclease PH (EC:2.7.7.56) rbh
Ribonuclease PH {ECO:0000256|HAMAP-Rule:MF_00564, ECO:0000256|SAAS:SAAS00104182}; Short=RNase PH {ECO:0000256|HAMAP-Rule:MF_00564};; EC=2.7.7.56 {ECO:0000256|HAMAP-Rule:MF_00564, ECO:0000256|SAAS:SAAS
Ribonuclease PH n=5 Tax=Bifidobacterium breve RepID=F6C7G5_BIFBA rbh
NECEvent2014_7_3_scaffold_16_19
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25627..26949)
DNA (1323bp) protein (441aa)
Nicotinate phosphoribosyltransferase {ECO:0000256|RuleBase:RU003838, ECO:0000256|SAAS:SAAS00075163}; EC=6.3.4.21 {ECO:0000256|RuleBase:RU003838, ECO:0000256|SAAS:SAAS00075163};; TaxID=1261072 species=
Nicotinate phosphoribosyltransferase n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2E4U5_BIFBR rbh
Nicotinate phosphoribosyltransferase rbh
NECEvent2014_7_3_scaffold_16_20
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27057..27683
DNA (627bp) protein (209aa)
Uncharacterized protein n=3 Tax=Bifidobacterium breve RepID=H3KZJ1_BIFBR rbh
putative membrane spanning protein
Putative membrane spanning protein {ECO:0000313|EMBL:AHJ20606.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bre
NECEvent2014_7_3_scaffold_16_21
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27691..28119)
DNA (429bp) protein (143aa)
Transcriptional regulator, MerR family n=3 Tax=Bifidobacterium breve RepID=F6C7G2_BIFBA
Transcriptional regulator, MerR family
Transcriptional regulator, MerR family {ECO:0000313|EMBL:AHJ18681.1}; TaxID=1385940 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium
NECEvent2014_7_3_scaffold_16_22
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28378..29388
DNA (1011bp) protein (337aa)
Oxidoreductase, aldo/keto reductase family protein n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2CAA7_BIFBR rbh
Oxidoreductase rbh
Oxidoreductase, aldo/keto reductase family protein {ECO:0000313|EMBL:ERI87424.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bif
NECEvent2014_7_3_scaffold_16_23
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29584..29868)
DNA (285bp) protein (95aa)
Uncharacterized protein n=5 Tax=Bifidobacterium breve RepID=F6C7G0_BIFBA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAQ99375.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213
NECEvent2014_7_3_scaffold_16_24
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29970..30470
DNA (501bp) protein (167aa)
Phosphopantetheine adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109024}; EC=2.7.7.3 {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109037};; Dephospho-CoA pyr
Phosphopantetheine adenylyltransferase n=6 Tax=Bifidobacterium breve RepID=F6C7F9_BIFBA rbh
Phosphopantetheine adenylyltransferase
NECEvent2014_7_3_scaffold_16_25
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30476..31261
DNA (786bp) protein (262aa)
Uncharacterized protein n=4 Tax=Bifidobacterium breve RepID=F6C7F8_BIFBA rbh
Hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABE95095.1}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain N
NECEvent2014_7_3_scaffold_16_26
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

31377..31997
DNA (621bp) protein (207aa)
Putative ACR n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2CTN8_BIFBR rbh
Putative ACR {ECO:0000313|EMBL:ERI87428.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
hypothetical protein
NECEvent2014_7_3_scaffold_16_27
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


32087..32281
DNA (195bp) protein (65aa)
50S ribosomal protein L32 n=6 Tax=Bifidobacterium breve RepID=F6C7F6_BIFBA
LSU ribosomal protein L32P
50S ribosomal protein L32 {ECO:0000256|HAMAP-Rule:MF_00340}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM
NECEvent2014_7_3_scaffold_16_28
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

32452..33195
DNA (744bp) protein (248aa)
Ribonuclease 3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231299}; EC=3.1.26.3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231445};; Ribonuclease 3; Ribonuclease III {ECO:00
Ribonuclease 3 n=6 Tax=Bifidobacterium breve RepID=F6C7F5_BIFBA rbh
Ribonuclease III
Displaying items 1-30 of 71 in total

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