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NECEvent2014_7_3_scaffold_173

Alias: 177_003_scaffold_173

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_7_3_scaffold_173_1
Enterococcus faecalis, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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2..898
DNA (897bp) protein (299aa)
rpoB; DNA-directed RNA polymerase, beta subunit (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase su
DNA-directed RNA polymerase subunit beta n=22 Tax=Enterococcus faecalis RepID=C0X0W9_ENTFL
NECEvent2014_7_3_scaffold_173_2
Enterococcus faecalis, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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1065..4718
DNA (3654bp) protein (1218aa)
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase
rpoC; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta' n=269 Tax=Enterococcus RepID=RPOC_ENTFA rbh
NECEvent2014_7_3_scaffold_173_3
Enterococcus faecalis, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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comp(4767..5459)
DNA (693bp) protein (231aa)
Peptidase A24A n=15 Tax=Enterococcus faecalis RepID=C7UYZ8_ENTFL rbh
Bacterial peptidase A24 protein {ECO:0000313|EMBL:EPI27626.1}; TaxID=1244143 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecalis VC1
bacterial Peptidase A24 protein
NECEvent2014_7_3_scaffold_173_4
Enterococcus faecalis, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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5568..7088
DNA (1521bp) protein (507aa)
Carbohydrate kinase n=15 Tax=Enterococcus faecalis RepID=C7UYZ7_ENTFL rbh
Putative gluconokinase {ECO:0000313|EMBL:EFT38406.1}; TaxID=749491 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecalis TX2137.;"
gluconate kinase
NECEvent2014_7_3_scaffold_173_5
Enterococcus faecalis, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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7172..7891
DNA (720bp) protein (240aa)
Predicted protein n=15 Tax=Enterococcus faecalis RepID=C7UYZ6_ENTFL rbh
Uncharacterized protein {ECO:0000313|EMBL:EFT38407.1}; TaxID=749491 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecalis TX2137.;"
Lipoprotein, putative
NECEvent2014_7_3_scaffold_173_6
Enterococcus faecalis, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

8019..8486
DNA (468bp) protein (156aa)
DNA-binding ferritin-like protein (Oxidative damage protectant) n=293 Tax=Enterococcus RepID=D4MFR7_9ENTE rbh
dps; DNA starvation/stationary phase protection protein Dps
DNA protection during starvation protein {ECO:0000313|EMBL:EGG50080.1}; TaxID=749517 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faec
NECEvent2014_7_3_scaffold_173_7
Enterococcus faecalis, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


8606..9151
DNA (546bp) protein (182aa)
50S ribosomal protein L13 n=72 Tax=Enterococcus RepID=C0X0X5_ENTFL rbh
50S ribosomal protein L13 {ECO:0000256|HAMAP-Rule:MF_01366, ECO:0000256|RuleBase:RU003878}; TaxID=1134800 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" sour
rplM; 50S ribosomal protein L13
NECEvent2014_7_3_scaffold_173_8
Enterococcus faecalis, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


9165..9557
DNA (393bp) protein (131aa)
30S ribosomal protein S9 n=294 Tax=Enterococcus RepID=RS9_ENTFA
rpsI; 30S ribosomal protein S9
30S ribosomal protein S9 {ECO:0000256|HAMAP-Rule:MF_00532, ECO:0000256|RuleBase:RU003816}; TaxID=1151196 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" sourc
NECEvent2014_7_3_scaffold_173_9
Enterococcus faecalis, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(9764..10105)
DNA (342bp) protein (114aa)
Transposase domain protein n=1 Tax=Enterococcus faecalis E12 RepID=U2UTZ0_ENTFL
Uncharacterized protein {ECO:0000313|EMBL:EFT38412.1}; TaxID=749491 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecalis TX2137.;"
ATP-dependent protease
NECEvent2014_7_3_scaffold_173_10
Enterococcus faecalis, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(10131..10442)
DNA (312bp) protein (104aa)
Uncharacterized protein n=1 Tax=Enterococcus faecalis EnGen0345 RepID=R3FJN6_ENTFL
Transposase {ECO:0000313|EMBL:EFM80456.1}; TaxID=749511 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecalis TX0855.;"
Transposase
NECEvent2014_7_3_scaffold_173_11
Enterococcus faecalis, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

10816..11046
DNA (231bp) protein (77aa)
Predicted protein n=14 Tax=Enterococcus faecalis RepID=C7UYZ1_ENTFL
Cro/CI family transcriptional regulator {ECO:0000313|EMBL:ERT21553.1}; TaxID=1391468 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faec
Cro/CI family transcriptional regulator
NECEvent2014_7_3_scaffold_173_12
Enterococcus faecalis, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

11173..11373
DNA (201bp) protein (67aa)
Predicted protein n=2 Tax=Enterococcus faecalis RepID=C7UYZ0_ENTFL
Transcriptional regulator, Cro/CI family {ECO:0000313|EMBL:EFT38414.1}; TaxID=749491 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faec
Cro/CI family transcriptional regulator
NECEvent2014_7_3_scaffold_173_13
Enterococcus faecalis, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

11363..12490
DNA (1128bp) protein (376aa)
Uncharacterized protein n=14 Tax=Enterococcus faecalis RepID=E6HM82_ENTFL rbh
Uncharacterized protein {ECO:0000313|EMBL:EFT38415.1}; TaxID=749491 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecalis TX2137.;"
hypothetical protein rbh
NECEvent2014_7_3_scaffold_173_14
Enterococcus faecalis, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

12487..13293
DNA (807bp) protein (269aa)
Predicted protein n=14 Tax=Enterococcus faecalis RepID=C7UYY8_ENTFL rbh
Uncharacterized protein {ECO:0000313|EMBL:EFT38416.1}; TaxID=749491 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecalis TX2137.;"
NECEvent2014_7_3_scaffold_173_15
Enterococcus faecalis, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

13299..14039
DNA (741bp) protein (247aa)
Methyltransferase {ECO:0000256|RuleBase:RU362026}; EC=2.1.1.- {ECO:0000256|RuleBase:RU362026};; TaxID=749491 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" s
yhdJ; DNA adenine methyltransferase YhdJ (EC:2.1.1.72)
DNA-methyltransferase n=14 Tax=Enterococcus faecalis RepID=C7UYY7_ENTFL rbh
NECEvent2014_7_3_scaffold_173_16
Chlamydia trachomatis, Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

14439..14999
DNA (561bp) protein (187aa)
Predicted protein n=15 Tax=Enterococcus faecalis RepID=C7UYY6_ENTFL rbh
Uncharacterised protein {ECO:0000313|EMBL:CRH69502.1}; TaxID=813 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia trachomatis.;
hypothetical protein
NECEvent2014_7_3_scaffold_173_17
Enterococcus faecalis, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(15146..16912)
DNA (1767bp) protein (589aa)
Sigma-54 interaction domain protein n=69 Tax=Enterococcus faecalis RepID=F0PCE3_ENTF6 rbh
Sigma-54 interaction domain protein {ECO:0000313|EMBL:EPH88168.1}; TaxID=1260359 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecalis
DEAH-box family ATP-dependent helicase
Displaying 17 items

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