ggKbase home page

NECEvent2014_7_3_scaffold_342_14

Organism: NECEvent2014_7_3_Escherichia_coli_51_37_partial

partial RP 23 / 55 MC: 4 BSCG 24 / 51 MC: 1 ASCG 10 / 38 MC: 3
Location: comp(12293..12370)

Top 3 Functional Annotations

Value Algorithm Source
Integrase core domain protein (Fragment) n=1 Tax=Escherichia coli P0304816.2 RepID=N4BU24_ECOLX similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 25.0
  • Bit_score: 56
  • Evalue 5.10e-06
Transposase {ECO:0000313|EMBL:AJB52133.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;" UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 25.0
  • Bit_score: 56
  • Evalue 6.90e-06
transposase InsC3 for insertion sequence ISEc9 similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 25.0
  • Bit_score: 56
  • Evalue 1.60e-06

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Escherichia coli → Escherichia → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 78
GCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAA
PROTEIN sequence
Length: 26
AEQEGQLIETEATGAPQKHHHTLNQ*