Value | Algorithm | Source | Identity | Coverage | Bit score | Evalue | Cross references |
---|---|---|---|---|---|---|---|
rRNA pseudouridine synthase; K11131 H/ACA ribonucleoprotein complex subunit 4 [EC:5.4.99.-] Tax=AR5 |
UNIPROT
DB: UniProtKB |
100.0 | 313.0 | 619 | 3.30e-174 | ggdbv1_18248010 | |
Probable tRNA pseudouridine synthase B n=1 Tax=Ferroglobus placidus (strain DSM 10642 / AEDII12DO) RepID=D3RXV8_FERPA | similarity |
UNIREF
DB: UNIREF90 |
50.0 | 0.0 | 298 | 2.00e+00 | fpl:Ferp_1162 |
rRNA pseudouridine synthase | similarity |
KEGG
DB: KEGG |
50.0 | 302.0 | 298 | 2.00e-78 | fpl:Ferp_1162 |
seg (db=Seg db_id=seg from=122 to=135) | iprscan |
interpro
DB: Seg |
0.0 | 0.0 | 0 | 0.0 | fpl:Ferp_1162 |
Pseudouridine synthase (db=superfamily db_id=SSF55120 from=12 to=228 evalue=1.7e-61 interpro_id=IPR020103 interpro_description=Pseudouridine synthase, catalytic domain GO=Biological Process: pseudouridine synthesis (GO:0001522), Molecular Function: RNA binding (GO:0003723), Biological Process: RNA modification (GO:0009451), Molecular Function: pseudouridine synthase activity (GO:0009982)) | iprscan |
interpro
DB: superfamily |
0.0 | 0.0 | 0 | 1.00e+00 | fpl:Ferp_1162 |
no description (db=HMMSmart db_id=SM00359 from=230 to=302 evalue=1.7e-07 interpro_id=IPR002478 interpro_description=Pseudouridine synthase/archaeosine transglycosylase GO=Molecular Function: RNA binding (GO:0003723)) | iprscan |
interpro
DB: HMMSmart |
0.0 | 0.0 | 0 | 1.00e+00 | fpl:Ferp_1162 |
CBF5: putative rRNA pseudouridine synthase (db=HMMTigr db_id=TIGR00425 from=2 to=312 evalue=2.6e-112 interpro_id=IPR004802 interpro_description=Pseudouridine synthase-related GO=Biological Process: RNA processing (GO:0006396)) | iprscan |
interpro
DB: HMMTigr |
0.0 | 0.0 | 0 | 2.00e+00 | fpl:Ferp_1162 |
(db=HMMPfam db_id=PF08068 from=12 to=45 evalue=3.6e-08 interpro_id=IPR012960 interpro_description=Dyskerin-like) | iprscan |
interpro
DB: HMMPfam |
0.0 | 0.0 | 0 | 3.00e+00 | fpl:Ferp_1162 |
(db=HMMPfam db_id=PF01472 from=230 to=295 evalue=4.3e-11 interpro_id=IPR002478 interpro_description=Pseudouridine synthase/archaeosine transglycosylase GO=Molecular Function: RNA binding (GO:0003723)) | iprscan |
interpro
DB: HMMPfam |
0.0 | 0.0 | 0 | 4.00e+00 | fpl:Ferp_1162 |
CENTROMERE/MICROTUBULE BINDING PROTEIN CBF5 (db=HMMPanther db_id=PTHR23127 from=13 to=309 evalue=5.1e-92 interpro_id=IPR004802 interpro_description=Pseudouridine synthase-related GO=Biological Process: RNA processing (GO:0006396)) | iprscan |
interpro
DB: HMMPanther |
0.0 | 0.0 | 0 | 5.00e+00 | fpl:Ferp_1162 |
(db=HMMPfam db_id=PF01509 from=49 to=162 evalue=8.7e-25 interpro_id=IPR002501 interpro_description=Pseudouridine synthase II GO=Biological Process: RNA processing (GO:0006396)) | iprscan |
interpro
DB: HMMPfam |
0.0 | 0.0 | 0 | 8.00e+00 | fpl:Ferp_1162 |
no description (db=Gene3D db_id=G3DSA:2.30.130.10 from=227 to=290 evalue=8.8e-07) | iprscan |
interpro
DB: Gene3D |
0.0 | 0.0 | 0 | 8.00e+00 | fpl:Ferp_1162 |
PUA domain-like (db=superfamily db_id=SSF88697 from=228 to=310 evalue=9.1e-15 interpro_id=IPR015947 interpro_description=PUA-like domain) | iprscan |
interpro
DB: superfamily |
0.0 | 0.0 | 0 | 9.00e+00 | fpl:Ferp_1162 |
PUA (db=ProfileScan db_id=PS50890 from=229 to=302 evalue=13.324 interpro_id=IPR002478 interpro_description=Pseudouridine synthase/archaeosine transglycosylase GO=Molecular Function: RNA binding (GO:0003723)) | iprscan |
interpro
DB: ProfileScan |
0.0 | 0.0 | 0 | 1.30e+01 | fpl:Ferp_1162 |