ggKbase home page

gwa2_scaffold_192

Alias: GW2011_AR5_3

Search features with annotation key words

Displaying items 1-30 of 205 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
gwa2_scaffold_192_1
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

comp(13..390)
DNA (378bp) protein (126aa)
methionine-R-sulfoxide reductase; K07305 peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12] Tax=AR5
Peptide methionine sulfoxide reductase MsrB n=3 Tax=Leptospira RepID=K6HTC8_LEPIR
methionine-R-sulfoxide reductase
METHIONINE SULFOXIDE REDUCTASE (db=HMMPanther db_id=PTHR10173 from=2 to=123 evalue=2.0e-46)
gwa2_scaffold_192_2
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

589..867
DNA (279bp) protein (93aa)
Ferredoxin, 2Fe-2S family protein n=1 Tax=Leptospira interrogans serovar Icterohaemorrhagiae str. Verdun HP RepID=M6RDY5_LEPIR
ferredoxin-like protein Tax=AR5
ferredoxin-like protein
(db=HMMPfam db_id=PF01257 from=11 to=90 evalue=1.6e-06 interpro_id=IPR002023 interpro_description=NADH:ubiquinone oxidoreductase, 24kDa subunit GO=Molecular Function: oxidoreductase activity (GO:0016491), Molecular Function: NAD binding (GO:0051287), Biological Process: oxidation-reduction process (GO:0055114))
gwa2_scaffold_192_3
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

870..971
DNA (102bp) protein (34aa)
transmembrane_regions Tax=AR5
transmembrane_regions (db=TMHMM db_id=tmhmm from=4 to=23)
seg (db=Seg db_id=seg from=8 to=24)
gwa2_scaffold_192_4
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

comp(996..1862)
DNA (867bp) protein (289aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Candidatus Nitrosopumilus koreensis AR1 RepID=K0B3I9_9ARCH
NAD-dependent epimerase/dehydratase Tax=AR5
NAD-dependent epimerase/dehydratase
(db=HMMPfam db_id=PF01370 from=3 to=209 evalue=1.1e-45 interpro_id=IPR001509 interpro_description=NAD-dependent epimerase/dehydratase GO=Molecular Function: catalytic activity (GO:0003824), Biological Process: cellular metabolic process (GO:0044237), Molecular Function: coenzyme binding (GO:0050662))
gwa2_scaffold_192_5
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

comp(1901..2068)
DNA (168bp) protein (56aa)
transmembrane_regions Tax=AR5
transmembrane_regions (db=TMHMM db_id=tmhmm from=32 to=54)
(db=HMMPfam db_id=PF03911 from=16 to=54 evalue=2.7e-07 interpro_id=IPR005609 interpro_description=Preprotein translocase Sec, Sec61-beta subunit)
gwa2_scaffold_192_6

Not on your lists

comp(2084..2779)
DNA (696bp) protein (232aa)
Glycosyl transferase family 2 n=1 Tax=Methanocaldococcus infernus (strain DSM 11812 / JCM 15783 / ME) RepID=D5VR74_METIM
Glycosyl transferase family 2 {ECO:0000313|EMBL:KHO47995.1}; TaxID=1579367 species="Archaea.;" source="archaeon GW2011_AR5.;"
glycosyl transferase family 2
seg (db=Seg db_id=seg from=29 to=40)
gwa2_scaffold_192_7
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

3042..3629
DNA (588bp) protein (196aa)
thymidylate kinase; K00943 dTMP kinase [EC:2.7.4.9] Tax=AR5
thymidylate kinase (EC:2.7.4.9)
Probable thymidylate kinase n=1 Tax=Candidatus Parvarchaeum acidophilus ARMAN-5 RepID=D6GWU1_9EURY
(db=HMMPfam db_id=PF02223 from=8 to=188 evalue=1.0e-43 interpro_id=IPR018094 interpro_description=Thymidylate kinase GO=Molecular Function: thymidylate kinase activity (GO:0004798), Molecular Function: ATP binding (GO:0005524), Biological Process: dTDP biosynthetic process (GO:0006233))
gwa2_scaffold_192_8
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

comp(3640..4206)
DNA (567bp) protein (189aa)
Segregation and condensation protein B n=1 Tax=Candidatus Nanosalina sp. J07AB43 RepID=G0QHH0_9EURY
chromosome segregation and condensation protein ScpB; K06024 segregation and condensation protein B Tax=AR5
chromosome segregation and condensation protein ScpB
coiled-coil (db=Coil db_id=coil from=20 to=41 evalue=NA)
gwa2_scaffold_192_9
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

comp(4224..5051)
DNA (828bp) protein (276aa)
Chromosome segregation and condensation protein ScpA n=1 Tax=Candidatus Parvarchaeum acidiphilum ARMAN-4 RepID=D2EEF4_9EURY
condensin subunit ScpA; K05896 segregation and condensation protein A Tax=AR5
Chromosome segregation and condensation protein ScpA
seg (db=Seg db_id=seg from=3 to=35)
gwa2_scaffold_192_10
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

comp(5035..5556)
DNA (522bp) protein (174aa)
Bifunctional deaminase-reductase domain protein n=1 Tax=Candidatus Parvarchaeum acidophilus ARMAN-5 RepID=D6GUM0_9EURY
dihydrofolate reductase-like protein Tax=AR5
Bifunctional deaminase-reductase protein
RIBOFLAVIN-SPECIFIC DEAMINASE (db=HMMPanther db_id=PTHR11079:SF10 from=86 to=156 evalue=0.00032 interpro_id=IPR004794 interpro_description=Riboflavin biosynthesis protein RibD GO=Molecular Function: diaminohydroxyphosphoribosylaminopyrimidine deaminase activity (GO:0008835), Biological Process: riboflavin biosynthetic process (GO:0009231), Biological Process: oxidation-reduction process (GO:0055114))
gwa2_scaffold_192_11
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

comp(5561..7972)
DNA (2412bp) protein (804aa)
SMC structural maintenance of chromosomes family protein n=1 Tax=Candidatus Nanosalinarum sp. J07AB56 RepID=G0QDR5_9EURY
SMC domain-containing protein; K03529 chromosome segregation protein Tax=AR5
SMC domain-containing protein
seg (db=Seg db_id=seg from=221 to=234)
gwa2_scaffold_192_12
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

comp(7972..8124)
DNA (153bp) protein (51aa)
alias=gwa2_scaffold_192_12 Tax=AR5
gwa2_scaffold_192_13
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

comp(8174..8974)
DNA (801bp) protein (267aa)
Putative membrane protein n=3 Tax=Bacillus megaterium RepID=D5D9X2_BACMD
hypothetical protein Tax=AR5
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
gwa2_scaffold_192_14
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

9056..10276
DNA (1221bp) protein (407aa)
Geranylgeranyl reductase n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XW49_9BACT
geranylgeranyl reductase Tax=AR5
geranylgeranyl reductase
FLAVOPROTEIN-UBIQUINONE OXIDOREDUCTASE (db=HMMPanther db_id=PTHR10617 from=40 to=392 evalue=1.7e-34)
gwa2_scaffold_192_15
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

10289..10765
DNA (477bp) protein (159aa)
alias=gwa2_scaffold_192_15 Tax=AR5
gwa2_scaffold_192_16
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists


10783..11382
DNA (600bp) protein (200aa)
O-sialoglycoprotein endopeptidase/protein kinase (EC:3.4.24.57); K15904 bifunctional tRNA threonylcarbamoyladenosine biosynthesis protein [EC:2.7.11.1] Tax=AR5
O-sialoglycoprotein endopeptidase/protein kinase (EC:3.4.24.57)
Probable bifunctional tRNA threonylcarbamoyladenosine biosynthesis protein n=3 Tax=Methanocaldococcus RepID=KAE1B_METJA
PROTEIN_KINASE_TYR (db=PatternScan db_id=PS00109 from=107 to=119 evalue=0.0 interpro_id=IPR008266 interpro_description=Tyrosine-protein kinase, active site GO=Molecular Function: protein tyrosine kinase activity (GO:0004713), Biological Process: protein phosphorylation (GO:0006468))
gwa2_scaffold_192_17
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists


11379..11915
DNA (537bp) protein (179aa)
30S ribosomal protein S15/S13e n=2 Tax=Methanotorris RepID=F6BB63_METIK
30S ribosomal protein S15; K02956 small subunit ribosomal protein S15 Tax=AR5
rps15; 30S ribosomal protein S15/S13e
seg (db=Seg db_id=seg from=99 to=111)
gwa2_scaffold_192_18
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

11949..13289
DNA (1341bp) protein (447aa)
hypothetical protein; K00992 [EC:2.7.7.-] Tax=AR5
Putative uncharacterized protein n=1 Tax=Candidatus Parvarchaeum acidophilus ARMAN-5 RepID=D6GVD0_9EURY
hypothetical protein
(db=HMMPfam db_id=PF01896 from=104 to=232 evalue=2.0e-06 interpro_id=IPR002755 interpro_description=DNA primase, small subunit GO=Molecular Function: DNA primase activity (GO:0003896), Biological Process: DNA replication, synthesis of RNA primer (GO:0006269))
gwa2_scaffold_192_19
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

13456..13959
DNA (504bp) protein (168aa)
Uncharacterized protein (Fragment) n=1 Tax=Thermoplasmatales archaeon SCGC AB-540-F20 RepID=M7TCN8_9EURY
Uncharacterized protein (Fragment) Tax=AR5
gwa2_scaffold_192_20
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

13989..15362
DNA (1374bp) protein (458aa)
Pyrrolo-quinoline quinone n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U242_9CHLR
pyrrolo-quinoline quinone Tax=AR5
WD40-like repeat protein
Quinoprotein alcohol dehydrogenase-like (db=superfamily db_id=SSF50998 from=46 to=266 evalue=4.3e-30 interpro_id=IPR011047 interpro_description=Quinonprotein alcohol dehydrogenase-like)
gwa2_scaffold_192_21

Not on your lists

15407..15697
DNA (291bp) protein (97aa)
50S ribosomal protein L44e n=2 Tax=Thermococcus RepID=C5A6Y0_THEGJ
50S ribosomal protein L44e {ECO:0000256|HAMAP-Rule:MF_01476}; TaxID=1579367 species="Archaea.;" source="archaeon GW2011_AR5.;"
50S ribosomal protein L44e
(db=HMMPfam db_id=PF00935 from=16 to=92 evalue=1.9e-20 interpro_id=IPR000552 interpro_description=Ribosomal protein L44e GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
gwa2_scaffold_192_22
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

15869..16507
DNA (639bp) protein (213aa)
Putative membrane protein n=1 Tax=Candidatus Nanosalina sp. J07AB43 RepID=G0QF22_9EURY
Putative membrane protein Tax=AR5
coiled-coil (db=Coil db_id=coil from=43 to=64 evalue=NA)
transmembrane_regions (db=TMHMM db_id=tmhmm from=15 to=37)
gwa2_scaffold_192_23
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

16619..17560
DNA (942bp) protein (314aa)
rRNA pseudouridine synthase; K11131 H/ACA ribonucleoprotein complex subunit 4 [EC:5.4.99.-] Tax=AR5
Probable tRNA pseudouridine synthase B n=1 Tax=Ferroglobus placidus (strain DSM 10642 / AEDII12DO) RepID=D3RXV8_FERPA
rRNA pseudouridine synthase
seg (db=Seg db_id=seg from=122 to=135)
gwa2_scaffold_192_24
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

17638..18396
DNA (759bp) protein (253aa)
alias=gwa2_scaffold_192_24 Tax=AR5
gwa2_scaffold_192_25
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

18393..19598
DNA (1206bp) protein (402aa)
AICAR transformylase/IMP cyclohydrolase PurH; K00602 phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] Tax=AR5
AICAR transformylase/IMP cyclohydrolase PurH n=1 Tax=Spirochaeta africana (strain ATCC 700263 / DSM 8902 / Z-7692) RepID=H9UJI1_SPIAZ
AICAR transformylase/IMP cyclohydrolase PurH
no description (db=HMMSmart db_id=SM00798 from=3 to=312 evalue=1.7e-15 interpro_id=IPR002695 interpro_description=AICARFT/IMPCHase bienzyme GO=Molecular Function: IMP cyclohydrolase activity (GO:0003937), Molecular Function: phosphoribosylaminoimidazolecarboxamide formyltransferase activity (GO:0004643), Biological Process: purine nucleotide biosynthetic process (GO:0006164))
gwa2_scaffold_192_26
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

19719..19886
DNA (168bp) protein (56aa)
UPF0434 protein HY04AAS1_0488 n=3 Tax=Hydrogenobaculum RepID=B4U7R4_HYDS0
UPF0434 protein ycaR; K09791 hypothetical protein Tax=AR5
protein of unknown function DUF343
gwa2_scaffold_192_27
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

comp(19887..20450)
DNA (564bp) protein (188aa)
Metal dependent phosphohydrolase n=1 Tax=Desulfatibacillum alkenivorans (strain AK-01) RepID=B8FDS6_DESAA
metal dependent phosphohydrolase; K07023 putative hydrolases of HD superfamily Tax=AR5
metal dependent phosphohydrolase
(db=HMMPfam db_id=PF01966 from=35 to=134 evalue=1.7e-05 interpro_id=IPR006674 interpro_description=Metal-dependent phosphohydrolase, HD subdomain GO=Molecular Function: phosphoric diester hydrolase activity (GO:0008081), Molecular Function: metal ion binding (GO:0046872))
gwa2_scaffold_192_28
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

comp(20447..20941)
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=Ciona intestinalis RepID=F6Y8H0_CIOIN
similar to putative c-Myc-responsive Tax=AR5
hypothetical protein
(db=HMMPfam db_id=PF05014 from=4 to=119 evalue=1.9e-10 interpro_id=IPR007710 interpro_description=Nucleoside 2-deoxyribosyltransferase GO=Biological Process: deoxyribonucleoside monophosphate catabolic process (GO:0009159), Molecular Function: nucleoside deoxyribosyltransferase activity (GO:0050144), Molecular Function: deoxyribonucleoside 5'-monophosphate N-glycosidase activity (GO:0070694))
gwa2_scaffold_192_29
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

comp(21195..22058)
DNA (864bp) protein (288aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=K5YJ49_9PORP
hypothetical protein Tax=AR5
hypothetical protein
Trypsin-like serine proteases (db=superfamily db_id=SSF50494 from=6 to=268 evalue=1.6e-16 interpro_id=IPR009003 interpro_description=Peptidase cysteine/serine, trypsin-like GO=Molecular Function: catalytic activity (GO:0003824))
gwa2_scaffold_192_30
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

22179..23339
DNA (1161bp) protein (387aa)
Putative Na+/H+ antiporter n=1 Tax=Uncultured methanogenic archaeon RC-I RepID=Q0W0Q8_UNCMA
putative Na+/H+ antiporter Tax=AR5
putative Na+/H+ antiporter
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=26)
Displaying items 1-30 of 205 in total

View Taxonomy