ggKbase | annotations

Value	Algorithm	Source	Identity	Coverage	Bit score	Evalue	Cross references
SRP54-type protein, GTPase domain n=1 Tax=sediment metagenome RepID=D9PEV7_9ZZZZ	similarity	UNIREF DB: UNIREF90	49.0	0.0	441	3.00e+00	arg:QT11_C0001G0284
GTP-binding signal recognition particle SRP54 G-domain protein; K03106 signal recognition particle subunit SRP54 Tax=AR6		UNIPROT DB: UniProtKB	100.0	448.0	866	2.20e-248	ggdbv1_5043770
SRP54-type protein, GTPase protein	similarity	KEGG DB: KEGG	55.5	434.0	488	1.50e-135	arg:QT11_C0001G0284
seg (db=Seg db_id=seg from=9 to=21)	iprscan	interpro DB: Seg	0.0	0.0	0	0.0	arg:QT11_C0001G0284
SRP54 (db=PatternScan db_id=PS00300 from=264 to=277 evalue=0.0 interpro_id=IPR000897 interpro_description=Signal recognition particle, SRP54 subunit, GTPase GO=Molecular Function: GTP binding (GO:0005525), Biological Process: SRP-dependent cotranslational protein targeting to membrane (GO:0006614))	iprscan	interpro DB: PatternScan	0.0	0.0	0	0.0	arg:QT11_C0001G0284
coiled-coil (db=Coil db_id=coil from=311 to=332 evalue=NA)	iprscan	interpro DB: Coil	0.0	0.0	0	0.0	arg:QT11_C0001G0284
(db=HMMPfam db_id=PF00448 from=100 to=291 evalue=1.7e-62 interpro_id=IPR000897 interpro_description=Signal recognition particle, SRP54 subunit, GTPase GO=Molecular Function: GTP binding (GO:0005525), Biological Process: SRP-dependent cotranslational protein targeting to membrane (GO:0006614))	iprscan	interpro DB: HMMPfam	0.0	0.0	0	1.00e+00	arg:QT11_C0001G0284
(db=HMMPfam db_id=PF02881 from=6 to=82 evalue=1.2e-18 interpro_id=IPR013822 interpro_description=Signal recognition particle, SRP54 subunit, helical bundle GO=Molecular Function: GTP binding (GO:0005525), Biological Process: SRP-dependent cotranslational protein targeting to membrane (GO:0006614))	iprscan	interpro DB: HMMPfam	0.0	0.0	0	1.00e+00	arg:QT11_C0001G0284
P-loop containing nucleoside triphosphate hydrolases (db=superfamily db_id=SSF52540 from=90 to=293 evalue=1.2e-46)	iprscan	interpro DB: superfamily	0.0	0.0	0	1.00e+00	arg:QT11_C0001G0284
Signal peptide-binding domain (db=superfamily db_id=SSF47446 from=293 to=426 evalue=1.2e-38 interpro_id=IPR004125 interpro_description=Signal recognition particle, SRP54 subunit, M-domain GO=Biological Process: SRP-dependent cotranslational protein targeting to membrane (GO:0006614), Molecular Function: 7S RNA binding (GO:0008312), Cellular Component: signal recognition particle (GO:0048500))	iprscan	interpro DB: superfamily	0.0	0.0	0	1.00e+00	arg:QT11_C0001G0284
(db=HMMPfam db_id=PF02978 from=322 to=420 evalue=2.5e-28 interpro_id=IPR004125 interpro_description=Signal recognition particle, SRP54 subunit, M-domain GO=Biological Process: SRP-dependent cotranslational protein targeting to membrane (GO:0006614), Molecular Function: 7S RNA binding (GO:0008312), Cellular Component: signal recognition particle (GO:0048500))	iprscan	interpro DB: HMMPfam	0.0	0.0	0	2.00e+00	arg:QT11_C0001G0284
no description (db=Gene3D db_id=G3DSA:3.40.50.300 from=91 to=293 evalue=2.8e-58)	iprscan	interpro DB: Gene3D	0.0	0.0	0	2.00e+00	arg:QT11_C0001G0284
no description (db=HMMSmart db_id=SM00382 from=97 to=290 evalue=2.8e-07 interpro_id=IPR003593 interpro_description=ATPase, AAA+ type, core GO=Molecular Function: nucleotide binding (GO:0000166), Molecular Function: nucleoside-triphosphatase activity (GO:0017111))	iprscan	interpro DB: HMMSmart	0.0	0.0	0	2.00e+00	arg:QT11_C0001G0284
no description (db=Gene3D db_id=G3DSA:1.20.120.140 from=4 to=91 evalue=3.2e-19 interpro_id=IPR013822 interpro_description=Signal recognition particle, SRP54 subunit, helical bundle GO=Molecular Function: GTP binding (GO:0005525), Biological Process: SRP-dependent cotranslational protein targeting to membrane (GO:0006614))	iprscan	interpro DB: Gene3D	0.0	0.0	0	3.00e+00	arg:QT11_C0001G0284
GTPASE CONTAINING FAMILY OF SIGNAL RECOGNITION PARTICLE PROTEINS (db=HMMPanther db_id=PTHR11564 from=74 to=424 evalue=5.8e-123)	iprscan	interpro DB: HMMPanther	0.0	0.0	0	5.00e+00	arg:QT11_C0001G0284
no description (db=Gene3D db_id=G3DSA:1.10.260.30 from=322 to=425 evalue=6.0e-28 interpro_id=IPR004125 interpro_description=Signal recognition particle, SRP54 subunit, M-domain GO=Biological Process: SRP-dependent cotranslational protein targeting to membrane (GO:0006614), Molecular Function: 7S RNA binding (GO:0008312), Cellular Component: signal recognition particle (GO:0048500))	iprscan	interpro DB: Gene3D	0.0	0.0	0	6.00e+00	arg:QT11_C0001G0284
Domain of the SRP/SRP receptor G-proteins (db=superfamily db_id=SSF47364 from=6 to=91 evalue=7.4e-20 interpro_id=IPR013822 interpro_description=Signal recognition particle, SRP54 subunit, helical bundle GO=Molecular Function: GTP binding (GO:0005525), Biological Process: SRP-dependent cotranslational protein targeting to membrane (GO:0006614))	iprscan	interpro DB: superfamily	0.0	0.0	0	7.00e+00	arg:QT11_C0001G0284

SRP54-type protein, GTPase domain n=1 Tax=sediment metagenome RepID=D9PEV7_9ZZZZ

similarity

UNIREF
DB: UNIREF90

49.0

0.0

441

3.00e+00

GTP-binding signal recognition particle SRP54 G-domain protein; K03106 signal recognition particle subunit SRP54 Tax=AR6

UNIPROT
DB: UniProtKB

100.0

448.0

866

2.20e-248

ggdbv1_5043770

SRP54-type protein, GTPase protein

similarity

KEGG
DB: KEGG

55.5

434.0

488

1.50e-135

arg:QT11_C0001G0284

seg (db=Seg db_id=seg from=9 to=21)

iprscan

interpro
DB: Seg

0.0

0

0.0

arg:QT11_C0001G0284

SRP54 (db=PatternScan db_id=PS00300 from=264 to=277 evalue=0.0 interpro_id=IPR000897 interpro_description=Signal recognition particle, SRP54 subunit, GTPase GO=Molecular Function: GTP binding (GO:0005525), Biological Process: SRP-dependent cotranslational protein targeting to membrane (GO:0006614))

iprscan

interpro
DB: PatternScan

0.0

0

0.0

arg:QT11_C0001G0284

coiled-coil (db=Coil db_id=coil from=311 to=332 evalue=NA)

iprscan

interpro
DB: Coil

0.0

0

0.0

arg:QT11_C0001G0284

(db=HMMPfam db_id=PF00448 from=100 to=291 evalue=1.7e-62 interpro_id=IPR000897 interpro_description=Signal recognition particle, SRP54 subunit, GTPase GO=Molecular Function: GTP binding (GO:0005525), Biological Process: SRP-dependent cotranslational protein targeting to membrane (GO:0006614))

iprscan

interpro
DB: HMMPfam

0.0

0

1.00e+00

arg:QT11_C0001G0284

(db=HMMPfam db_id=PF02881 from=6 to=82 evalue=1.2e-18 interpro_id=IPR013822 interpro_description=Signal recognition particle, SRP54 subunit, helical bundle GO=Molecular Function: GTP binding (GO:0005525), Biological Process: SRP-dependent cotranslational protein targeting to membrane (GO:0006614))

iprscan

interpro
DB: HMMPfam

0.0

0

1.00e+00

arg:QT11_C0001G0284

P-loop containing nucleoside triphosphate hydrolases (db=superfamily db_id=SSF52540 from=90 to=293 evalue=1.2e-46)

iprscan

interpro
DB: superfamily

0.0

0

1.00e+00

arg:QT11_C0001G0284

Signal peptide-binding domain (db=superfamily db_id=SSF47446 from=293 to=426 evalue=1.2e-38 interpro_id=IPR004125 interpro_description=Signal recognition particle, SRP54 subunit, M-domain GO=Biological Process: SRP-dependent cotranslational protein targeting to membrane (GO:0006614), Molecular Function: 7S RNA binding (GO:0008312), Cellular Component: signal recognition particle (GO:0048500))

iprscan

interpro
DB: superfamily

0.0

0

1.00e+00

arg:QT11_C0001G0284

(db=HMMPfam db_id=PF02978 from=322 to=420 evalue=2.5e-28 interpro_id=IPR004125 interpro_description=Signal recognition particle, SRP54 subunit, M-domain GO=Biological Process: SRP-dependent cotranslational protein targeting to membrane (GO:0006614), Molecular Function: 7S RNA binding (GO:0008312), Cellular Component: signal recognition particle (GO:0048500))

iprscan

interpro
DB: HMMPfam

0.0

0

2.00e+00

arg:QT11_C0001G0284

no description (db=Gene3D db_id=G3DSA:3.40.50.300 from=91 to=293 evalue=2.8e-58)

iprscan

interpro
DB: Gene3D

0.0

0

2.00e+00

arg:QT11_C0001G0284

no description (db=HMMSmart db_id=SM00382 from=97 to=290 evalue=2.8e-07 interpro_id=IPR003593 interpro_description=ATPase, AAA+ type, core GO=Molecular Function: nucleotide binding (GO:0000166), Molecular Function: nucleoside-triphosphatase activity (GO:0017111))

iprscan

interpro
DB: HMMSmart

0.0

0

2.00e+00

arg:QT11_C0001G0284

no description (db=Gene3D db_id=G3DSA:1.20.120.140 from=4 to=91 evalue=3.2e-19 interpro_id=IPR013822 interpro_description=Signal recognition particle, SRP54 subunit, helical bundle GO=Molecular Function: GTP binding (GO:0005525), Biological Process: SRP-dependent cotranslational protein targeting to membrane (GO:0006614))

iprscan

interpro
DB: Gene3D

0.0

0

3.00e+00

arg:QT11_C0001G0284

GTPASE CONTAINING FAMILY OF SIGNAL RECOGNITION PARTICLE PROTEINS (db=HMMPanther db_id=PTHR11564 from=74 to=424 evalue=5.8e-123)

iprscan

interpro
DB: HMMPanther

0.0

0

5.00e+00

arg:QT11_C0001G0284

no description (db=Gene3D db_id=G3DSA:1.10.260.30 from=322 to=425 evalue=6.0e-28 interpro_id=IPR004125 interpro_description=Signal recognition particle, SRP54 subunit, M-domain GO=Biological Process: SRP-dependent cotranslational protein targeting to membrane (GO:0006614), Molecular Function: 7S RNA binding (GO:0008312), Cellular Component: signal recognition particle (GO:0048500))

iprscan

interpro
DB: Gene3D

0.0

0

6.00e+00

arg:QT11_C0001G0284

Domain of the SRP/SRP receptor G-proteins (db=superfamily db_id=SSF47364 from=6 to=91 evalue=7.4e-20 interpro_id=IPR013822 interpro_description=Signal recognition particle, SRP54 subunit, helical bundle GO=Molecular Function: GTP binding (GO:0005525), Biological Process: SRP-dependent cotranslational protein targeting to membrane (GO:0006614))

iprscan

interpro
DB: superfamily

0.0

0

7.00e+00

arg:QT11_C0001G0284

gwa2_scaffold_315_8 Annotations

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