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gwa2_scaffold_315

Alias: GW2011_AR6_1

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Displaying items 1-30 of 176 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
gwa2_scaffold_315_1
AR6, Pacearchaeaota, DPANN, Archaea

Not on your lists

comp(88..264)
DNA (177bp) protein (59aa)
30S ribosomal protein S27e n=1 Tax=Methanocaldococcus infernus (strain DSM 11812 / JCM 15783 / ME) RepID=D5VS88_METIM
ribosomal protein S27E; K02978 small subunit ribosomal protein S27e Tax=AR6
30S ribosomal protein S27e
Zn-binding ribosomal proteins (db=superfamily db_id=SSF57829 from=6 to=58 evalue=2.6e-14 interpro_id=IPR011332 interpro_description=Ribosomal protein, zinc-binding domain GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
gwa2_scaffold_315_2
AR6, Pacearchaeaota, DPANN, Archaea

Not on your lists

comp(329..661)
DNA (333bp) protein (111aa)
50S ribosomal protein L44e n=1 Tax=Cenarchaeum symbiosum (strain A) RepID=A0RZ36_CENSY
50S ribosomal protein L44e Tax=AR6
LSU ribosomal protein L44E
60S RIBOSOMAL PROTEIN L44 (db=HMMPanther db_id=PTHR10369 from=8 to=35 evalue=0.0009 interpro_id=IPR000552 interpro_description=Ribosomal protein L44e GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
gwa2_scaffold_315_3
AR6, Pacearchaeaota, DPANN, Archaea

Not on your lists

comp(681..1346)
DNA (666bp) protein (222aa)
Putative uncharacterized protein n=1 Tax=sediment metagenome RepID=D9PEW2_9ZZZZ
Putative uncharacterized protein Tax=AR6
hypothetical protein
seg (db=Seg db_id=seg from=70 to=81)
gwa2_scaffold_315_4
AR6, Pacearchaeaota, DPANN, Archaea

Not on your lists

comp(1412..2650)
DNA (1239bp) protein (413aa)
speE2; spermidine synthase (EC:2.5.1.16); K00797 spermidine synthase [EC:2.5.1.16] Tax=AR6
speE2; spermidine synthase (EC:2.5.1.16)
Spermidine synthase 2 n=135 Tax=Leptospira RepID=SPEE2_LEPIN
(db=HMMPfam db_id=PF01564 from=137 to=372 evalue=1.2e-80 interpro_id=IPR001045 interpro_description=Spermine synthase GO=Molecular Function: catalytic activity (GO:0003824))
gwa2_scaffold_315_5
AR6, Pacearchaeaota, DPANN, Archaea

Not on your lists

2781..3806
DNA (1026bp) protein (342aa)
Signal recognition particle GTPase n=1 Tax=sediment metagenome RepID=D9PEV9_9ZZZZ
signal recognition particle-docking protein ftsy; K03110 fused signal recognition particle receptor Tax=AR6
Signal recognition particle GTPase
seg (db=Seg db_id=seg from=20 to=47)
gwa2_scaffold_315_6
AR6, Pacearchaeaota, DPANN, Archaea

Not on your lists

comp(3807..3971)
DNA (165bp) protein (55aa)
Tax=AR6
gwa2_scaffold_315_7
AR6, Pacearchaeaota, DPANN, Archaea

Not on your lists

comp(3949..4551)
DNA (603bp) protein (201aa)
Death-on-curing family protein n=1 Tax=Asticcacaulis excentricus (strain ATCC 15261 / DSM 4724 / VKM B-1370 / CB 48) RepID=E8RVD3_ASTEC
death-on-curing family protein; K07341 death on curing protein Tax=AR6
death-on-curing family protein
(db=HMMPfam db_id=PF02661 from=56 to=129 evalue=1.4e-06 interpro_id=IPR003812 interpro_description=Filamentation induced by cAMP/death on curing-related)
gwa2_scaffold_315_8
AR6, Pacearchaeaota, DPANN, Archaea

Not on your lists


4641..5987
DNA (1347bp) protein (449aa)
SRP54-type protein, GTPase domain n=1 Tax=sediment metagenome RepID=D9PEV7_9ZZZZ
GTP-binding signal recognition particle SRP54 G-domain protein; K03106 signal recognition particle subunit SRP54 Tax=AR6
SRP54-type protein, GTPase protein
seg (db=Seg db_id=seg from=9 to=21)
gwa2_scaffold_315_9
AR6, Pacearchaeaota, DPANN, Archaea

Not on your lists

6053..6292
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) RepID=Q8PU07_METMA
hypothetical protein Tax=AR6
hypothetical protein
(db=HMMPfam db_id=PF10884 from=1 to=72 evalue=7.6e-26 interpro_id=IPR020271 interpro_description=Uncharacterised protein family, MJ1172)
gwa2_scaffold_315_10
AR6, Pacearchaeaota, DPANN, Archaea

Not on your lists

6295..6558
DNA (264bp) protein (88aa)
Putative toxin RelE4 n=1 Tax=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) RepID=RELE4_METJA
hypothetical protein Tax=AR6
hypothetical protein
coiled-coil (db=Coil db_id=coil from=18 to=39 evalue=NA)
gwa2_scaffold_315_11
AR6, Pacearchaeaota, DPANN, Archaea

Not on your lists

6609..7061
DNA (453bp) protein (151aa)
Holliday junction resolvase-like protein n=1 Tax=Turneriella parva (strain ATCC BAA-1111 / DSM 21527 / NCTC 11395 / H) RepID=I4B863_TURPD
hypothetical protein Tax=AR6
Holliday junction resolvase-like protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=24)
gwa2_scaffold_315_12
AR6, Pacearchaeaota, DPANN, Archaea

Not on your lists

7169..8671
DNA (1503bp) protein (501aa)
AAA+ family ATPase n=1 Tax=Anaerobaculum mobile (strain ATCC BAA-54 / DSM 13181 / NGA) RepID=I4BXJ8_ANAMD
cell division control protein Tax=AR6
AAA ATPase
seg (db=Seg db_id=seg from=268 to=280)
gwa2_scaffold_315_13
AR6, Pacearchaeaota, DPANN, Archaea

Not on your lists

8721..9128
DNA (408bp) protein (136aa)
Cell division protein FtsZ, C-terminal Tax=AR6
Tubulin C-terminal domain-like (db=superfamily db_id=SSF55307 from=32 to=135 evalue=1.4e-08 interpro_id=IPR008280 interpro_description=Tubulin/FtsZ, C-terminal GO=Molecular Function: GTPase activity (GO:0003924), Molecular Function: GTP binding (GO:0005525), Biological Process: GTP catabolic process (GO:0006184), Cellular Component: protein complex (GO:0043234), Biological Process: protein polymerization (GO:0051258))
(db=HMMPfam db_id=PF12327 from=78 to=135 evalue=3.7e-08 interpro_id=IPR024757 interpro_description=Cell division protein FtsZ, C-terminal)
gwa2_scaffold_315_14
AR6, Pacearchaeaota, DPANN, Archaea

Not on your lists

9207..9833
DNA (627bp) protein (209aa)
Protein containing Nucleotidyltransferase domain n=1 Tax=sediment metagenome RepID=D9PJC4_9ZZZZ
Protein containing Nucleotidyltransferase domain Tax=AR6
hypothetical protein
seg (db=Seg db_id=seg from=131 to=141)
gwa2_scaffold_315_15
AR6, Pacearchaeaota, DPANN, Archaea

Not on your lists

9815..10336
DNA (522bp) protein (174aa)
Uncharacterized protein n=1 Tax=Methanobacterium formicicum DSM 3637 RepID=K2R3X1_METFO
Uncharacterized protein Tax=AR6
hypothetical protein
coiled-coil (db=Coil db_id=coil from=109 to=130 evalue=NA)
gwa2_scaffold_315_16
AR6, Pacearchaeaota, DPANN, Archaea

Not on your lists

10565..11173
DNA (609bp) protein (203aa)
Uncharacterized protein n=1 Tax=Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP) RepID=L0HFZ5_METFS
Uncharacterized protein Tax=AR6
hypothetical protein
(db=HMMPfam db_id=PF01936 from=6 to=183 evalue=1.3e-11 interpro_id=IPR021139 interpro_description=NYN domain, limkain-b1-type)
gwa2_scaffold_315_17
AR6, Pacearchaeaota, DPANN, Archaea

Not on your lists

11175..11909
DNA (735bp) protein (245aa)
Uncharacterized protein n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MHC0_9BACT
Uncharacterized protein Tax=AR6
hypothetical protein
seg (db=Seg db_id=seg from=2 to=19)
gwa2_scaffold_315_18
AR6, Pacearchaeaota, DPANN, Archaea

Not on your lists

11943..13871
DNA (1929bp) protein (643aa)
Helicase/UvrB domain Tax=AR6
seg (db=Seg db_id=seg from=103 to=120)
no description (db=HMMSmart db_id=SM00491 from=519 to=637 evalue=0.0067 interpro_id=IPR006555 interpro_description=Helicase, ATP-dependent, c2 type GO=Molecular Function: nucleic acid binding (GO:0003676), Molecular Function: ATP binding (GO:0005524), Biological Process: nucleobase-containing compound metabolic process (GO:0006139), Molecular Function: ATP-dependent helicase activity (GO:0008026), Molecular Function: hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides (GO:0016
(db=HMMPfam db_id=PF04851 from=21 to=93 evalue=2.9e-07 interpro_id=IPR006935 interpro_description=Helicase/UvrB domain GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: ATP binding (GO:0005524), Molecular Function: hydrolase activity (GO:0016787))
gwa2_scaffold_315_19
AR6, Pacearchaeaota, DPANN, Archaea

Not on your lists

14025..14654
DNA (630bp) protein (210aa)
Uncharacterized protein n=1 Tax=Haloquadratum walsbyi (strain DSM 16854 / JCM 12705 / C23) RepID=G0LG48_HALWC
hypothetical protein Tax=AR6
hypothetical protein
gwa2_scaffold_315_20
AR6, Pacearchaeaota, DPANN, Archaea

Not on your lists

14663..15349
DNA (687bp) protein (229aa)
Uncharacterized protein n=1 Tax=Haloquadratum walsbyi (strain DSM 16854 / JCM 12705 / C23) RepID=G0LG49_HALWC
hypothetical protein Tax=AR6
hypothetical protein
seg (db=Seg db_id=seg from=60 to=71)
gwa2_scaffold_315_21
AR6, Pacearchaeaota, DPANN, Archaea

Not on your lists

comp(15412..16410)
DNA (999bp) protein (333aa)
Filamentation induced by cAMP protein Fic n=1 Tax=Methanoplanus limicola DSM 2279 RepID=H1YZU4_9EURY
filamentation induced by cAMP protein fic Tax=AR6
Filamentation induced by cAMP protein Fic
seg (db=Seg db_id=seg from=71 to=87)
gwa2_scaffold_315_22
AR6, Pacearchaeaota, DPANN, Archaea

Not on your lists

comp(16626..16817)
DNA (192bp) protein (64aa)
seg Tax=AR6
seg (db=Seg db_id=seg from=13 to=25)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=25)
gwa2_scaffold_315_23
AR6, Pacearchaeaota, DPANN, Archaea

Not on your lists

17139..19970
DNA (2832bp) protein (944aa)
type ii site-specific deoxyribonuclease (EC:3.1.21.4) Tax=AR6
Putative DNA methylase n=1 Tax=planctomycete KSU-1 RepID=I3IMJ5_9PLAN
type IV restriction endonuclease
seg (db=Seg db_id=seg from=368 to=384)
gwa2_scaffold_315_24
AR6, Pacearchaeaota, DPANN, Archaea

Not on your lists

comp(19974..21413)
DNA (1440bp) protein (480aa)
Uncharacterized protein n=1 Tax=Acinetobacter sp. ANC 3929 RepID=N9K6C8_9GAMM
hypothetical protein Tax=AR6
Hypothetical protein
seg (db=Seg db_id=seg from=446 to=456)
gwa2_scaffold_315_25
AR6, Pacearchaeaota, DPANN, Archaea

Not on your lists

21589..22002
DNA (414bp) protein (138aa)
seg Tax=AR6
seg (db=Seg db_id=seg from=36 to=48)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=23)
gwa2_scaffold_315_26
AR6, Pacearchaeaota, DPANN, Archaea

Not on your lists

comp(21989..22213)
DNA (225bp) protein (75aa)
coiled-coil Tax=AR6
coiled-coil (db=Coil db_id=coil from=49 to=70 evalue=NA)
gwa2_scaffold_315_27
AR6, Pacearchaeaota, DPANN, Archaea

Not on your lists

22276..23493
DNA (1218bp) protein (406aa)
exodeoxyribonuclease VII large subunit (EC:3.1.11.6); K03601 exodeoxyribonuclease VII large subunit [EC:3.1.11.6] Tax=AR6
exodeoxyribonuclease VII large subunit (EC:3.1.11.6)
Exodeoxyribonuclease 7 large subunit n=1 Tax=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) RepID=EX7L_HALOH
seg (db=Seg db_id=seg from=113 to=134)
gwa2_scaffold_315_28
AR6, Pacearchaeaota, DPANN, Archaea

Not on your lists

23483..23698
DNA (216bp) protein (72aa)
exodeoxyribonuclease VII small subunit; K03602 exodeoxyribonuclease VII small subunit [EC:3.1.11.6] Tax=AR6
Exodeoxyribonuclease 7 small subunit n=1 Tax=Peptoniphilus duerdenii ATCC BAA-1640 RepID=E0NMX4_9FIRM
xseB; exodeoxyribonuclease VII, small subunit
XseB-like (db=superfamily db_id=SSF116842 from=1 to=64 evalue=1.3e-13)
gwa2_scaffold_315_29
AR6, Pacearchaeaota, DPANN, Archaea

Not on your lists

23790..24572
DNA (783bp) protein (261aa)
seg Tax=AR6
seg (db=Seg db_id=seg from=59 to=73)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
gwa2_scaffold_315_30
AR6, Pacearchaeaota, DPANN, Archaea

Not on your lists

24589..25191
DNA (603bp) protein (201aa)
seg Tax=AR6
seg (db=Seg db_id=seg from=16 to=28)
transmembrane_regions (db=TMHMM db_id=tmhmm from=106 to=125)
Displaying items 1-30 of 176 in total

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