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ACD9_25_6

Organism: ACD9

partial RP 33 / 55 MC: 8 BSCG 28 / 51 MC: 5 ASCG 0 / 38
Location: 6424..7356

Top 3 Functional Annotations

Value Algorithm Source
ribosomal large subunit pseudouridine synthase D (EC:5.4.99.-) similarity KEGG
DB: KEGG
  • Identity: 40.7
  • Coverage: 312.0
  • Bit_score: 224
  • Evalue 4.70e-56
PSI_RLU (db=PatternScan db_id=PS01129 from=140 to=154 evalue=0.0 interpro_id=IPR006224 interpro_description=Pseudouridine synthase, RluC/RluD, conserved site GO=Biological Process: pseudouridine synthesis (GO:0001522), Molecular Function: RNA binding (GO:0003723), Biological Process: RNA modification (GO:0009451), Molecular Function: pseudouridine synthase activity (GO:0009982)) iprscan interpro
DB: PatternScan
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 0.0
rluA_subfam: pseudouridine synthase, RluA (db=HMMTigr db_id=TIGR00005 from=8 to=310 evalue=3.8e-77 interpro_id=IPR006225 interpro_description=Pseudouridine synthase, RluC/RluD GO=Biological Process: pseudouridine synthesis (GO:0001522), Molecular Function: RNA binding (GO:0003723), Biological Process: RNA modification (GO:0009451), Molecular Function: pseudouridine synthase activity (GO:0009982)) iprscan interpro
DB: HMMTigr
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 3.80e-77

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Taxonomy

uncultured bacterium → Bacteria

Sequences

DNA sequence
Length: 933
ATGGAAAAAATCATAATCGAAAAACAGGGCGCAGGATTGCGCGTAGATAAATTCCTGGCCAAGGAGTTTTTTTTGTATTCACGCGCTGAAATAGTACGCAGGATTAAGGATGGTCAAGTTTTGATCAATGGAAAAAGTGAAAAACCAAGCTATACACTGGAGGAAGATGATGAATTAGTTCTAAAAGGTTTTTCAAGAGAGCCGGTAGAAAACATTTTATTTGAAAATAGAGAAATAGCACTGGAAATACTTTTTGAAAATAACAATATAATTGTTATTAGTAAGCCAGCTGGCTTGCAGGTTCATCCTAGCTCTAATGAAAAAGAAAATACTTTAGTTAATGCATTGATTTGTAAATATCCTGAAATTAAAAATATTCATGATGAAAAGGAAGATGCTTGGACCAGACCGGGAATCGTGCATCGTTTAGATAAAGATACCTCAGGAGTTATGGTAATAGCTCGAAACATAGCAACACTTGAAAAGTTGAAAGAGCTTTTTAAAAATCGAAATATTGAAAAAACATATTTAGCTATCACTAGCGGAATTTTTAAAGAAAAGATTGGAATTATTGATAAACCTATTGCTAGATCAACTAGTTACAAGAAACAAGTTATTGCAAGAAACAACACAAAAACCACTATAAGAAGTGCCGAAACGCATTTCAGAGTATTAAAGGAATTCAATGAATATTCCTTAGTGGAAGTTTCTCCCAAGACAGGAAGAATGCATCAAATCAGAATCCATCTTTCTTTTATTGGGCATCCTGTTGTGGGTGATTTGATTTATGGAATTTCGCAGGGAGTGAAAGAAGAAGTTGAAAGGCAGCTTTTGCACGCTCATAAATTAAAATTTGAGCTTGATGGGGAAAAGTTTGAATTTGTTTCGCCTGAACCTAATGATTTTAAAGAATTTTTGAAGAGTAAAGAATAA
PROTEIN sequence
Length: 311
MEKIIIEKQGAGLRVDKFLAKEFFLYSRAEIVRRIKDGQVLINGKSEKPSYTLEEDDELVLKGFSREPVENILFENREIALEILFENNNIIVISKPAGLQVHPSSNEKENTLVNALICKYPEIKNIHDEKEDAWTRPGIVHRLDKDTSGVMVIARNIATLEKLKELFKNRNIEKTYLAITSGIFKEKIGIIDKPIARSTSYKKQVIARNNTKTTIRSAETHFRVLKEFNEYSLVEVSPKTGRMHQIRIHLSFIGHPVVGDLIYGISQGVKEEVERQLLHAHKLKFELDGEKFEFVSPEPNDFKEFLKSKE*