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gwa2_scaffold_3113

Alias: GWA2_CP_megabin_Ab397_150

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Displaying items 1-30 of 47 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
gwa2_scaffold_3113_1

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479..1387
-----------------
DNA (909bp)
protein (303aa)
Recombinase {ECO:0000313|EMBL:KKS36947.1}; TaxID=1618820 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_42_14.;"
recombinase
Recombinase
gwa2_scaffold_3113_2

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1455..2003
-----------------
DNA (549bp)
protein (183aa)
Uncharacterized protein {ECO:0000313|EMBL:KKS36948.1}; TaxID=1618820 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_42_14.;"
gwa2_scaffold_3113_3
RLO_RIF_OD1_13_41_11, RIF-OD1-13, Parcubacteria, Bacteria

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2008..2862
-----------------
DNA (855bp)
protein (285aa)
seg 10..19 Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_13_41_11_curated
gwa2_scaffold_3113_4

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3098..4624
-----------------
DNA (1527bp)
protein (509aa)
Recombinase {ECO:0000313|EMBL:KKS36950.1}; TaxID=1618820 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_42_14.;"
recombinase
Recombinase
gwa2_scaffold_3113_5
RLO_RIF_OD1_13_41_11, RIF-OD1-13, Parcubacteria, Bacteria

Not on your lists

comp(4652..5743)
-----------------
DNA (1092bp)
protein (364aa)
Uncharacterized protein
Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_13_41_11_curated
gwa2_scaffold_3113_6

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comp(6087..8294)
-----------------
DNA (2208bp)
protein (736aa)
Valine-tRNA ligase {ECO:0000313|EMBL:KKS36952.1}; TaxID=1618820 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_42_14.;"
valyl-tRNA synthetase
Valine--tRNA ligase
gwa2_scaffold_3113_7

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8459..10171
-----------------
DNA (1713bp)
protein (571aa)
delta-1-pyrroline-5-carboxylate dehydrogenase (EC:1.5.1.12)
Delta-1-pyrroline-5-carboxylate dehydrogenase {ECO:0000313|EMBL:KKS36953.1}; TaxID=1618820 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_42_14.;"
Delta-1-pyrroline-5-carboxylate dehydrogenase
gwa2_scaffold_3113_8

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10441..11079
-----------------
DNA (639bp)
protein (213aa)
NLP/P60 protein {ECO:0000313|EMBL:KKS36954.1}; TaxID=1618820 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_42_14.;"
NLP/P60 protein
NLP/P60 protein
gwa2_scaffold_3113_9
RLO_RIF_OD1_13_41_11, RIF-OD1-13, Parcubacteria, Bacteria

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comp(11163..11438)
-----------------
DNA (276bp)
protein (92aa)
HTH ArsR-type DNA-binding domain Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_13_41_11_curated
Putative transcriptional regulator
gwa2_scaffold_3113_10
RLO_RIF_OD1_13_41_11, RIF-OD1-13, Parcubacteria, Bacteria

Not on your lists


comp(11544..12911)
-----------------
DNA (1368bp)
protein (456aa)
putative DNA-binding/iron metalloprotein/AP endonuclease; K01409 O-sialoglycoprotein endopeptidase [EC:3.4.24.57] Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_13_41_11_curated
O-sialoglycoprotein endopeptidase
Probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp
gwa2_scaffold_3113_11
RLO_RIF_OD1_13_41_11, RIF-OD1-13, Parcubacteria, Bacteria

Not on your lists

13016..14308
-----------------
DNA (1293bp)
protein (431aa)
Zn-dependent peptidase Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_13_41_11_curated
zinc protease
Processing peptidase
gwa2_scaffold_3113_12
RLO_RIF_OD1_13_41_11, RIF-OD1-13, Parcubacteria, Bacteria

Not on your lists

comp(14516..14806)
-----------------
DNA (291bp)
protein (97aa)
Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_13_41_11_curated
gwa2_scaffold_3113_13

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comp(14978..15610)
-----------------
DNA (633bp)
protein (211aa)
Lipolytic enzyme, G-D-S-L {ECO:0000313|EMBL:KKS36959.1}; TaxID=1618820 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_42_14.;"
putative lipolytic enzyme, G-D-S-L
Lipolytic enzyme, G-D-S-L
gwa2_scaffold_3113_14
RLO_RIF_OD1_13_41_11, RIF-OD1-13, Parcubacteria, Bacteria

Not on your lists

comp(15607..15951)
-----------------
DNA (345bp)
protein (115aa)
Uncharacterized protein Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_13_41_11_curated
scyllo-inosamine-4-phosphate amidinotransferase
gwa2_scaffold_3113_15

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comp(15951..16472)
-----------------
DNA (522bp)
protein (174aa)
Scyllo-inosamine-4-phosphate amidinotransferase {ECO:0000313|EMBL:KKS36961.1}; TaxID=1618820 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_42_14.;"
scyllo-inosamine-4-phosphate amidinotransferase
gwa2_scaffold_3113_16

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comp(16502..16708)
-----------------
DNA (207bp)
protein (69aa)
Uncharacterized protein {ECO:0000313|EMBL:KKS36962.1}; TaxID=1618820 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_42_14.;"
helix-turn-helix family protein
Putative transcriptional regulator
gwa2_scaffold_3113_17
RLO_RIF_OD1_13_41_11, RIF-OD1-13, Parcubacteria, Bacteria

Not on your lists

comp(16951..17652)
-----------------
DNA (702bp)
protein (234aa)
orotidine-5'-phosphate decarboxylase (EC:4.1.1.23) Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_13_41_11_curated
orotidine-5'-phosphate decarboxylase (EC:4.1.1.23)
Orotidine 5'-phosphate decarboxylase
gwa2_scaffold_3113_18
RLO_RIF_OD1_13_41_11, RIF-OD1-13, Parcubacteria, Bacteria

Not on your lists

comp(17775..18155)
-----------------
DNA (381bp)
protein (127aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_13_41_11_curated
PAS/PAC sensor hybrid histidine kinase
Two component response regulator
gwa2_scaffold_3113_19

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comp(19162..19662)
-----------------
DNA (501bp)
protein (167aa)
Uncharacterized protein {ECO:0000313|EMBL:KKS36965.1}; TaxID=1618820 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_42_14.;"
gwa2_scaffold_3113_20

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comp(19788..20327)
-----------------
DNA (540bp)
protein (180aa)
Uncharacterized protein {ECO:0000313|EMBL:KKS36966.1}; TaxID=1618820 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_42_14.;"
gwa2_scaffold_3113_21

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comp(20402..21499)
-----------------
DNA (1098bp)
protein (366aa)
Type IV pilus assembly protein PilM {ECO:0000313|EMBL:KKS36967.1}; TaxID=1618820 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_42_14.;"
hypothetical protein
Type IV pilus assembly protein PilM
gwa2_scaffold_3113_22

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comp(21702..23135)
-----------------
DNA (1434bp)
protein (478aa)
Uncharacterized protein {ECO:0000313|EMBL:KKS36968.1}; TaxID=1618820 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_42_14.;"
gwa2_scaffold_3113_23
RLO_RIF_OD1_13_41_11, RIF-OD1-13, Parcubacteria, Bacteria

Not on your lists

comp(23128..23631)
-----------------
DNA (504bp)
protein (168aa)
Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_13_41_11_curated
gwa2_scaffold_3113_24
RLO_RIF_OD1_13_41_11, RIF-OD1-13, Parcubacteria, Bacteria

Not on your lists

comp(23698..24168)
-----------------
DNA (471bp)
protein (157aa)
id=2824648 Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_13_41_11_curated
gwa2_scaffold_3113_25

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comp(24288..24782)
-----------------
DNA (495bp)
protein (165aa)
Uncharacterized protein {ECO:0000313|EMBL:KKS36971.1}; TaxID=1618820 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_42_14.;"
gwa2_scaffold_3113_26
RLO_RIF_OD1_13_41_11, RIF-OD1-13, Parcubacteria, Bacteria

Not on your lists

comp(24825..26045)
-----------------
DNA (1221bp)
protein (407aa)
type IV pilin; K02653 type IV pilus assembly protein PilC Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_13_41_11_curated
type IV pilin
Type IV pilin
gwa2_scaffold_3113_27

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comp(26128..27882)
-----------------
DNA (1755bp)
protein (585aa)
Type II secretion system protein E {ECO:0000313|EMBL:KKS36973.1}; TaxID=1618820 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_42_14.;"
secretion system protein E
Type II secretion system protein E
gwa2_scaffold_3113_28
RLO_RIF_OD1_13_41_11, RIF-OD1-13, Parcubacteria, Bacteria

Not on your lists

comp(28048..28464)
-----------------
DNA (417bp)
protein (139aa)
two component transcriptional regulator, winged helix family; K07658 two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_13_41_11_
two component transcriptional regulator, winged helix family
Diguanylate cyclase GGDEF domain protein
gwa2_scaffold_3113_29

Not on your lists

comp(28475..29440)
-----------------
DNA (966bp)
protein (322aa)
Multi-sensor signal transduction histidine kinase {ECO:0000313|EMBL:KKS36975.1}; TaxID=1618820 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_42_14.;"
multi-sensor signal transduction histidine kinase
Multi-sensor signal transduction histidine kinase
gwa2_scaffold_3113_30
RLO_RIF_OD1_13_41_11, RIF-OD1-13, Parcubacteria, Bacteria

Not on your lists

29565..30887
-----------------
DNA (1323bp)
protein (441aa)
gabT; 4-aminobutyrate aminotransferase (EC:2.6.1.22); K07250 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase [EC:2.6.1.19 2.6.1.22] Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_13_41
gabT; 4-aminobutyrate aminotransferase (EC:2.6.1.22)
4-aminobutyrate aminotransferase
Displaying items 1-30 of 47 in total

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