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This organism can only be binned in the context of its binning project GWC2. Please contact the project owner (jbanfield@berkeley.edu) to become a member and gain access.

gwa2_scaffold_1170

Alias: GWA2_CP_megabin_Ab397_130

Search features with annotation key words

Displaying items 1-30 of 51 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
gwa2_scaffold_1170_1

Not on your lists

3..122
-----------------
DNA (120bp)
protein (40aa)
Uncharacterized protein {ECO:0000313|EMBL:KKR54708.1}; Flags: Fragment;; TaxID=1618816 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_40_23.;"
gwa2_scaffold_1170_2
GWC2_OD1_39_14, Parcubacteria, Bacteria

Not on your lists

240..1880
-----------------
DNA (1641bp)
protein (547aa)
(p)ppGpp synthetase I SpoT/RelA (EC:2.7.6.5)
GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase)(PpGpp synthetase I) ((P)ppGpp synthetase) Tax=GWC2_OD1_39_14
GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase)(PpGpp synthetase I) ((P)ppGpp synthetase)
gwa2_scaffold_1170_3

Not on your lists

1985..3436
-----------------
DNA (1452bp)
protein (484aa)
(p)ppGpp synthetase I SpoT/RelA (EC:2.7.6.5)
(P)ppGpp synthetase I, SpoT/RelA {ECO:0000313|EMBL:KKR54710.1}; TaxID=1618816 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_40_23.;"
(P)ppGpp synthetase I, SpoT/RelA
gwa2_scaffold_1170_4
GWC2_OD1_39_14, Parcubacteria, Bacteria

Not on your lists

3442..5604
-----------------
DNA (2163bp)
protein (721aa)
UPI000298F542 related cluster Tax=GWC2_OD1_39_14
UPI000298F542 related cluster
gwa2_scaffold_1170_5
GWC2_OD1_39_14, Parcubacteria, Bacteria

Not on your lists

5728..6756
-----------------
DNA (1029bp)
protein (343aa)
Tax=GWC2_OD1_39_14
gwa2_scaffold_1170_6
GWC2_OD1_39_14, Parcubacteria, Bacteria

Not on your lists

6753..7385
-----------------
DNA (633bp)
protein (211aa)
Tax=GWC2_OD1_39_14
gwa2_scaffold_1170_7
GWC2_OD1_39_14, Parcubacteria, Bacteria

Not on your lists

comp(7493..8089)
-----------------
DNA (597bp)
protein (199aa)
Tax=GWC2_OD1_39_14
gwa2_scaffold_1170_8
GWC2_OD1_39_14, Parcubacteria, Bacteria

Not on your lists

comp(8091..8969)
-----------------
DNA (879bp)
protein (293aa)
Stage 0 sporulation protein J Tax=GWC2_OD1_39_14
stage 0 sporulation protein J
Stage 0 sporulation protein J
gwa2_scaffold_1170_9
GWC2_OD1_39_14, Parcubacteria, Bacteria

Not on your lists

comp(8982..9743)
-----------------
DNA (762bp)
protein (254aa)
Chromosome partitioning protein, membrane-associated ATPase {ECO:0000313|EMBL:KKR06507.1}; TaxID=1618922 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_39_14.;"
cobyrinic acid ac-diamide synthase
Chromosome partitioning protein, membrane-associated ATPase
gwa2_scaffold_1170_10
GWC2_OD1_39_14, Parcubacteria, Bacteria

Not on your lists

comp(10021..10158)
-----------------
DNA (138bp)
protein (46aa)
Tax=GWC2_OD1_39_14
gwa2_scaffold_1170_11
GWC2_OD1_39_14, Parcubacteria, Bacteria

Not on your lists

10230..11132
-----------------
DNA (903bp)
protein (301aa)
Tax=GWC2_OD1_39_14
gwa2_scaffold_1170_12
GWC2_OD1_39_14, Parcubacteria, Bacteria

Not on your lists

11597..12550
-----------------
DNA (954bp)
protein (318aa)
Phosphoesterase {ECO:0000313|EMBL:KKR06510.1}; TaxID=1618922 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_39_14.;"
calcineurin-like phosphoesterase family protein
Phosphoesterase
gwa2_scaffold_1170_13
GWC2_OD1_39_14, Parcubacteria, Bacteria

Not on your lists

comp(12636..13778)
-----------------
DNA (1143bp)
protein (381aa)
Similar to mannosyltransferase B Tax=GWC2_OD1_39_14
group 1 glycosyl transferase
Similar to mannosyltransferase B
gwa2_scaffold_1170_14
GWC2_OD1_39_14, Parcubacteria, Bacteria

Not on your lists

comp(13783..14682)
-----------------
DNA (900bp)
protein (300aa)
D-alanyl-D-alanine carboxypeptidase {ECO:0000313|EMBL:KKR06512.1}; TaxID=1618922 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_39_14.;"
hypothetical protein
D-alanyl-D-alanine carboxypeptidase
gwa2_scaffold_1170_15
GWC2_OD1_39_14, Parcubacteria, Bacteria

Not on your lists

comp(14685..15233)
-----------------
DNA (549bp)
protein (183aa)
Segregation and condensation protein B Tax=GWC2_OD1_39_14
chromosome segregation and condensation protein ScpB
Segregation and condensation protein B
gwa2_scaffold_1170_16
GWC2_OD1_39_14, Parcubacteria, Bacteria

Not on your lists

comp(15236..15928)
-----------------
DNA (693bp)
protein (231aa)
Segregation and condensation protein A Tax=GWC2_OD1_39_14
chromosome segregation and condensation protein ScpA
Segregation and condensation protein A
gwa2_scaffold_1170_17
GWC2_OD1_39_14, Parcubacteria, Bacteria

Not on your lists

comp(15930..16229)
-----------------
DNA (300bp)
protein (100aa)
Uncharacterized protein {ECO:0000313|EMBL:KKR06515.1}; TaxID=1618922 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_39_14.;"
gwa2_scaffold_1170_18

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comp(16259..17599)
-----------------
DNA (1341bp)
protein (447aa)
Aspartyl-tRNA synthetase, archaeal type {ECO:0000313|EMBL:KKR54725.1}; TaxID=1618816 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_40_23.;"
aspartyl-tRNA synthetase, archaeal type
Aspartyl-tRNA synthetase, archaeal type
gwa2_scaffold_1170_19

Not on your lists

comp(17649..18932)
-----------------
DNA (1284bp)
protein (428aa)
asnS; asparaginyl-tRNA synthetase (EC:6.1.1.22)
Asparagine-tRNA ligase {ECO:0000313|EMBL:KKR54726.1}; TaxID=1618816 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_40_23.;"
Asparagine--tRNA ligase
gwa2_scaffold_1170_20
GWC2_OD1_39_14, Parcubacteria, Bacteria

Not on your lists

19139..19516
-----------------
DNA (378bp)
protein (126aa)
Tax=GWC2_OD1_39_14
gwa2_scaffold_1170_21
GWC2_OD1_39_14, Parcubacteria, Bacteria

Not on your lists

comp(19407..19961)
-----------------
DNA (555bp)
protein (185aa)
Tax=GWC2_OD1_39_14
gwa2_scaffold_1170_22
GWC2_OD1_39_14, Parcubacteria, Bacteria

Not on your lists

20505..21233
-----------------
DNA (729bp)
protein (243aa)
Tax=GWC2_OD1_39_14
gwa2_scaffold_1170_23
GWC2_OD1_39_14, Parcubacteria, Bacteria

Not on your lists

21452..22135
-----------------
DNA (684bp)
protein (228aa)
Tax=GWC2_OD1_39_14
gwa2_scaffold_1170_24
GWC2_OD1_39_14, Parcubacteria, Bacteria

Not on your lists

22185..22628
-----------------
DNA (444bp)
protein (148aa)
Tax=GWC2_OD1_39_14
gwa2_scaffold_1170_25
GWC2_OD1_39_14, Parcubacteria, Bacteria

Not on your lists

comp(23378..23872)
-----------------
DNA (495bp)
protein (165aa)
Tax=GWC2_OD1_39_14
gwa2_scaffold_1170_26
GWC2_OD1_39_14, Parcubacteria, Bacteria

Not on your lists

comp(24041..24622)
-----------------
DNA (582bp)
protein (194aa)
Tax=GWC2_OD1_39_14
gwa2_scaffold_1170_27
GWC2_OD1_39_14, Parcubacteria, Bacteria

Not on your lists

24917..25927
-----------------
DNA (1011bp)
protein (337aa)
Pseudouridine synthase Tax=GWC2_OD1_39_14
RNA pseudouridine synthase
Pseudouridine synthase
gwa2_scaffold_1170_28
GWC2_OD1_39_14, Parcubacteria, Bacteria

Not on your lists

26105..27778
-----------------
DNA (1674bp)
protein (558aa)
Polynucleotide adenylyltransferase region Tax=GWC2_OD1_39_14
polynucleotide adenylyltransferase
Polynucleotide adenylyltransferase region
gwa2_scaffold_1170_29
GWC2_OD1_39_14, Parcubacteria, Bacteria

Not on your lists

27775..28347
-----------------
DNA (573bp)
protein (191aa)
Guanylate kinase Tax=GWC2_OD1_39_14
gmk; guanylate kinase
Guanylate kinase
gwa2_scaffold_1170_30
GWC2_OD1_39_14, Parcubacteria, Bacteria

Not on your lists


28528..28902
-----------------
DNA (375bp)
protein (125aa)
50S ribosomal protein L19 Tax=GWC2_OD1_39_14
50S ribosomal protein L19
50S ribosomal protein L19
Displaying items 1-30 of 51 in total

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