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NECEvent2014_6_7_scaffold_287

Alias: 176_007_scaffold_287

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_6_7_scaffold_287_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(202..1053)
DNA (852bp) protein (284aa)
tsf; elongation factor Ts
Elongation factor Ts {ECO:0000256|HAMAP-Rule:MF_00050, ECO:0000256|RuleBase:RU000642}; Short=EF-Ts {ECO:0000256|HAMAP-Rule:MF_00050};; TaxID=1432557 species="Bacteria; Proteobacteria; Gammaproteobacte
NECEvent2014_6_7_scaffold_287_2
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(1190..1915)
DNA (726bp) protein (242aa)
30S ribosomal protein S2 n=9 Tax=Citrobacter RepID=C1MCT8_9ENTR rbh
30S ribosomal protein S2 rbh
30S ribosomal protein S2 {ECO:0000256|HAMAP-Rule:MF_00291}; TaxID=1333848 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freund
NECEvent2014_6_7_scaffold_287_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2240..3034
DNA (795bp) protein (265aa)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974
methionine aminopeptidase (EC:3.4.11.18)
Methionine aminopeptidase n=6 Tax=Citrobacter RepID=J1G2G3_9ENTR rbh
NECEvent2014_6_7_scaffold_287_4
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3148..5820
DNA (2673bp) protein (891aa)
protein-PII uridylyltransferase (EC:2.7.7.59) rbh
Bifunctional uridylyltransferase/uridylyl-removing enzyme n=2 Tax=Citrobacter freundii RepID=K8QV28_CITFR rbh
Bifunctional uridylyltransferase/uridylyl-removing enzyme {ECO:0000256|HAMAP-Rule:MF_00277, ECO:0000256|SAAS:SAAS00228994}; Short=UTase/UR {ECO:0000256|HAMAP-Rule:MF_00277};; Bifunctional [protein-PII
NECEvent2014_6_7_scaffold_287_5
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5852..6676
DNA (825bp) protein (275aa)
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase {ECO:0000256|HAMAP-Rule:MF_00811, ECO:0000256|SAAS:SAAS00013419}; EC=2.3.1.117 {ECO:0000256|HAMAP-Rule:MF_00811, ECO:0000256|SAAS:SAA
dapD; 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase (EC:2.3.1.117)
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase n=3 Tax=Citrobacter RepID=K8R1C9_CITFR rbh
NECEvent2014_6_7_scaffold_287_6
Citrobacter youngae, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6786..7172
DNA (387bp) protein (129aa)
UPF0325 protein CIT292_09533 n=10 Tax=Citrobacter RepID=D4BG87_9ENTR
hypothetical protein
UPF0325 protein CIT292_09533 {ECO:0000256|HAMAP-Rule:MF_01519}; TaxID=500640 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter fre
NECEvent2014_6_7_scaffold_287_7
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7260..8417)
DNA (1158bp) protein (386aa)
Carbohydrate diacid regulator n=7 Tax=Citrobacter RepID=C1MCT3_9ENTR rbh
Transcriptional regulator {ECO:0000313|EMBL:KJC13864.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii comp
transcriptional regulator
NECEvent2014_6_7_scaffold_287_8
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8565..9998)
DNA (1434bp) protein (478aa)
Serine endoprotease n=6 Tax=Citrobacter RepID=J1G2G7_9ENTR rbh
Serine endoprotease {ECO:0000313|EMBL:KJC13865.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;"
serine endoprotease
NECEvent2014_6_7_scaffold_287_9
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10128..11645)
DNA (1518bp) protein (506aa)
dgt; deoxyguanosinetriphosphate triphosphohydrolase (EC:3.1.5.1)
Deoxyguanosinetriphosphate triphosphohydrolase n=1 Tax=Citrobacter freundii GTC 09479 RepID=M3CFM0_CITFR rbh
Deoxyguanosinetriphosphate triphosphohydrolase {ECO:0000256|HAMAP-Rule:MF_00030}; Short=dGTP triphosphohydrolase {ECO:0000256|HAMAP-Rule:MF_00030};; Short=dGTPase {ECO:0000256|HAMAP-Rule:MF_00030};; E
NECEvent2014_6_7_scaffold_287_10
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11729..12427
DNA (699bp) protein (233aa)
5'-methylthioadenosine nucleosidase (EC:3.2.2.9)
5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase n=5 Tax=Citrobacter RepID=J0M4T1_9ENTR rbh
5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase {ECO:0000256|HAMAP-Rule:MF_01684, ECO:0000256|SAAS:SAAS00035261}; Short=MTA/SAH nucleosidase {ECO:0000256|HAMAP-Rule:MF_01684};; Short=MTAN {
NECEvent2014_6_7_scaffold_287_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12420..13220
DNA (801bp) protein (267aa)
Vitamin B12-binding protein n=3 Tax=Citrobacter RepID=J1G2B5_9ENTR rbh
Vitamin B12-binding protein {ECO:0000256|HAMAP-Rule:MF_01000}; Flags: Precursor;; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherich
vitamin B12-transporter protein BtuF rbh
NECEvent2014_6_7_scaffold_287_12
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13258..13881
DNA (624bp) protein (208aa)
Inner membrane protein n=6 Tax=Citrobacter RepID=J0LYD3_9ENTR rbh
Uncharacterized protein {ECO:0000313|EMBL:KJC03563.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii comple
hypothetical protein
NECEvent2014_6_7_scaffold_287_13
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14001..14345)
DNA (345bp) protein (115aa)
Iron-sulfur cluster insertion protein ErpA n=9 Tax=Enterobacteriaceae RepID=I6GF57_SHIFL
Iron-sulfur cluster insertion protein ErpA {ECO:0000256|HAMAP-Rule:MF_01380}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citr
iron-sulfur cluster insertion protein ErpA
NECEvent2014_6_7_scaffold_287_14
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14427..15848)
DNA (1422bp) protein (474aa)
H(+)/Cl(-) exchange transporter ClcA n=3 Tax=Citrobacter RepID=J0VR04_9ENTR rbh
H(+)/Cl(-) exchange transporter ClcA {ECO:0000256|HAMAP-Rule:MF_01128, ECO:0000256|SAAS:SAAS00010065}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enteroba
H(+)/Cl(-) exchange transporter ClcA
NECEvent2014_6_7_scaffold_287_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16017..17297
DNA (1281bp) protein (427aa)
Glutamate-1-semialdehyde 2,1-aminomutase {ECO:0000256|HAMAP-Rule:MF_00375, ECO:0000256|SAAS:SAAS00088818}; Short=GSA {ECO:0000256|HAMAP-Rule:MF_00375};; EC=5.4.3.8 {ECO:0000256|HAMAP-Rule:MF_00375, EC
glutamate-1-semialdehyde aminotransferase (EC:5.4.3.8)
Glutamate-1-semialdehyde 2,1-aminomutase n=3 Tax=Citrobacter RepID=K8R1B9_CITFR rbh
NECEvent2014_6_7_scaffold_287_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17371..19353)
DNA (1983bp) protein (661aa)
Iron(3+)-hydroxamate import system permease fhuB n=4 Tax=Citrobacter RepID=J1G2B8_9ENTR rbh
Iron(3+)-hydroxamate import system permease protein fhuB {ECO:0000313|EMBL:KEL79234.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Esc
iron ABC transporter
NECEvent2014_6_7_scaffold_287_17
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19350..20240)
DNA (891bp) protein (297aa)
Iron(3+)-hydroxamate-binding protein fhuD n=3 Tax=Citrobacter RepID=J0LYD8_9ENTR rbh
Iron(3+)-hydroxamate-binding protein fhuD {ECO:0000313|EMBL:ETX72218.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citro
iron-hydroxamate transporter substrate-binding subunit
NECEvent2014_6_7_scaffold_287_18
Citrobacter sp. KTE151, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20240..21037)
DNA (798bp) protein (266aa)
Iron-hydroxamate transporter ATP-binding subunit n=5 Tax=Citrobacter RepID=M3BGJ3_CITFR rbh
Iron(3+)-hydroxamate import ATP-binding protein FhuC {ECO:0000313|EMBL:EOQ51613.1}; TaxID=1169322 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citroba
iron-hydroxamate transporter ATP-binding subunit rbh
NECEvent2014_6_7_scaffold_287_19
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21084..21656)
DNA (573bp) protein (191aa)
Ferrichrome-iron receptor n=1 Tax=Citrobacter sp. KTE151 RepID=R8X8F4_9ENTR
Ferrichrome-iron receptor {ECO:0000313|EMBL:ETX72216.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii
ferrichrome outer membrane transporter
NECEvent2014_6_7_scaffold_287_20
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21795..23333)
DNA (1539bp) protein (513aa)
TonB-dependent siderophore receptor n=1 Tax=Citrobacter youngae ATCC 29220 RepID=D4BG73_9ENTR rbh
Ferrichrome transporter {ECO:0000313|EMBL:KJC03556.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii comple
ferrichrome outer membrane transporter
NECEvent2014_6_7_scaffold_287_21
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23544..24428)
DNA (885bp) protein (295aa)
Fimbrial protein domain-containing protein n=4 Tax=Citrobacter RepID=M3DMQ5_CITFR rbh
Fimbrial protein {ECO:0000313|EMBL:KJC03555.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" so
fimbrial protein domain-containing protein
NECEvent2014_6_7_scaffold_287_22
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24581..27073)
DNA (2493bp) protein (831aa)
P pilus assembly protein n=3 Tax=Citrobacter RepID=J1G2C1_9ENTR rbh
Uncharacterized protein {ECO:0000313|EMBL:ETX72214.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii co
membrane protein
NECEvent2014_6_7_scaffold_287_23
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27097..27810)
DNA (714bp) protein (238aa)
Uncharacterized protein n=1 Tax=Citrobacter sp. KTE30 RepID=R8V4P8_9ENTR rbh
Uncharacterized protein {ECO:0000313|EMBL:ETX72213.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii co
Pili assembly chaperone
NECEvent2014_6_7_scaffold_287_24
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27861..28403)
DNA (543bp) protein (181aa)
Fimbrial protein domain-containing protein n=2 Tax=Citrobacter RepID=K8QT76_CITFR rbh
Uncharacterized protein {ECO:0000313|EMBL:ETX72212.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii co
putative type I fimbriae
NECEvent2014_6_7_scaffold_287_25
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28472..28591
DNA (120bp) protein (40aa)
Uncharacterized protein n=2 Tax=Citrobacter RepID=J0VR13_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:ETX72211.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii co
NECEvent2014_6_7_scaffold_287_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28968..31505)
DNA (2538bp) protein (846aa)
Bifunctional glycosyl transferase/transpeptidase n=1 Tax=Citrobacter freundii ATCC 8090 = MTCC 1658 RepID=K8R1B1_CITFR rbh
Penicillin-binding protein 1B {ECO:0000256|PIRNR:PIRNR002799}; Short=PBP-1b {ECO:0000256|PIRNR:PIRNR002799};; Short=PBP1b {ECO:0000256|PIRNR:PIRNR002799};; Murein polymerase {ECO:0000256|PIRNR:PIRNR00
mrcB; bifunctional glycosyl transferase/transpeptidase
NECEvent2014_6_7_scaffold_287_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31683..34112)
DNA (2430bp) protein (810aa)
ATP-dependent RNA helicase HrpB n=3 Tax=Citrobacter RepID=J1G2C5_9ENTR rbh
ATP-dependent helicase HrpB {ECO:0000313|EMBL:CDL37472.1}; TaxID=1432557 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherich
ATP-dependent helicase HrpB
NECEvent2014_6_7_scaffold_287_28
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34186..34716
DNA (531bp) protein (177aa)
RNA 2',3'-cyclic phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_01940}; Short=RNA 2',3'-CPDase {ECO:0000256|HAMAP-Rule:MF_01940};; EC=3.1.4.- {ECO:0000256|HAMAP-Rule:MF_01940};; TaxID=1400136 species="B
2'-5'-RNA ligase n=4 Tax=Citrobacter RepID=J0LYE5_9ENTR rbh
2'-5' RNA ligase
NECEvent2014_6_7_scaffold_287_29
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34732..35436
DNA (705bp) protein (235aa)
Sugar fermentation stimulation protein homolog n=3 Tax=Citrobacter RepID=J1G2I6_9ENTR rbh
Sugar fermentation stimulation protein homolog {ECO:0000256|HAMAP-Rule:MF_00095}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobact
transcriptional regulator
NECEvent2014_6_7_scaffold_287_30
unknown

Not on your lists

35614..35673
DNA (60bp) protein (20aa)

This feature has no annotations

Displaying 30 items

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