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NECEvent2014_6_7_scaffold_64_54

Organism: NECEvent2014_6_7_Citrobacter_freundii-rel_52_48_partial

partial RP 20 / 55 MC: 2 BSCG 19 / 51 ASCG 9 / 38 MC: 2
Location: comp(57066..57788)

Top 3 Functional Annotations

Value Algorithm Source
Pili assembly chaperone n=5 Tax=Citrobacter RepID=J1G1Y7_9ENTR similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 240.0
  • Bit_score: 477
  • Evalue 6.50e-132
  • rbh
Pilus assembly protein PapD {ECO:0000313|EMBL:KJC10209.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii co similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 240.0
  • Bit_score: 477
  • Evalue 9.20e-132
pilus assembly protein PapD similarity KEGG
DB: KEGG
  • Identity: 86.7
  • Coverage: 240.0
  • Bit_score: 428
  • Evalue 1.30e-117

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Taxonomy

Citrobacter freundii → Citrobacter → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 723
ATGAGAGTAAAACTGCCTGTTAAGCAGTGTGCCTGCGCATGCCTGCTAGGGATGGTTGCGAGCGCCAACCTTGCCACTGCCAGTGGGCTGCAAATAGCCCCGGTCACGTTAACGTTGCAAGCGACGCAAAATGCCGATGGTATCTGGTTGAGTAACGCGGGTGAAAATGTGCTCAATGCCCAGGTTCGGGTTTTTCGCTGGAGTCAAAGTGCTTATGACAACAAACTTTCCCCCTCTCAGGGGCTGGTGATAAGCCCGCCGATGTTGGCATTAGCCCCTGGAGAACGTCAGTTGATTCGAGTTATTCGCACAAGCCCTCCCTCGGCACATGCCGAAGACGCTTATCGTTTGTCGATAGATGAGTTACCTCCTGCAAAAGTAGAAAAAAATAAACTTCAGTTTGTGCTGCATTATTCCGTTCCCGTTTTCATTCAACCAACATCAGCGGCACAAACGCAGGCAAAACTGCAATGGAAATTACAACAACTGGATGGCAAAAAATTTATTGAAGTCAGTAATCAGGGAAATGGGCATGCACAGTTATCTGCTGCAACATTTATAAGCCCTGACGGTACTAAAAAAGTCATTACACCCGGACTATTAGGCTACGTTTTACCAGGCTCAACAATGCGCTGGATAGTCTCCCCGTCGGCCAGTAATAATCATTATGGCGGGAAAATTGAAGTCACAATCAATGGCCAAAAAACAGTACAAGATCTGTAA
PROTEIN sequence
Length: 241
MRVKLPVKQCACACLLGMVASANLATASGLQIAPVTLTLQATQNADGIWLSNAGENVLNAQVRVFRWSQSAYDNKLSPSQGLVISPPMLALAPGERQLIRVIRTSPPSAHAEDAYRLSIDELPPAKVEKNKLQFVLHYSVPVFIQPTSAAQTQAKLQWKLQQLDGKKFIEVSNQGNGHAQLSAATFISPDGTKKVITPGLLGYVLPGSTMRWIVSPSASNNHYGGKIEVTINGQKTVQDL*