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ACD18_63

Alias: ACD18_138274.2613.5

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Displaying 4 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD18_63_1

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3..308
DNA (306bp) protein (102aa)
Holliday junction DNA helicase subunit RuvB
HOLLIDAY JUNCTION DNA HELICASE RUVB (db=HMMPanther db_id=PTHR13779:SF2 from=1 to=101 evalue=8.3e-41)
HOLLIDAY JUNCTION DNA HELICASE RUVB-RELATED (db=HMMPanther db_id=PTHR13779 from=1 to=101 evalue=8.3e-41)
RuvB_C (db=HMMPfam db_id=PF05491 from=24 to=99 evalue=6.9e-34 interpro_id=IPR008823 interpro_description=DNA helicase, Holliday junction RuvB type, C-terminal GO=Molecular Function: DNA binding (GO:0003677), Biological Process: DNA repair (GO:0006281), Biological Process: DNA recombination (GO:0006310), Molecular Function: four-way junction helicase activity (GO:0009378))
ACD18_63_2

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364..714
DNA (351bp) protein (117aa)
S23 ribosomal protein
Uncharacterised conserved protein, UCP035652 type (db=HMMPIR db_id=PIRSF035652 from=1 to=116 evalue=5.7e-26 interpro_id=IPR012657 interpro_description=Conserved hypothetical protein CHP02436)
TIGR02436: conserved hypothetical protein T (db=HMMTigr db_id=TIGR02436 from=8 to=116 evalue=6.2e-19 interpro_id=IPR012657 interpro_description=Conserved hypothetical protein CHP02436)
Ribosomal_S23p (db=HMMPfam db_id=PF05635 from=12 to=110 evalue=2.6e-14 interpro_id=IPR008815 interpro_description=23S rRNA-associated protein)
ACD18_63_3

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771..1019
DNA (249bp) protein (83aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=38 to=60)
transmembrane_regions (db=TMHMM db_id=tmhmm from=4 to=26)
seg (db=Seg db_id=seg from=2 to=23)
Uncharacterized protein {ECO:0000313|EMBL:EKE07501.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD18_63_4

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comp(2202..2645)
DNA (444bp) protein (148aa)
Elongation factor P
Nucleic acid-binding proteins (db=superfamily db_id=SSF50249 from=25 to=89 evalue=2.2e-18 interpro_id=IPR016027 interpro_description=Nucleic acid-binding, OB-fold-like)
no description (db=HMMSmart db_id=SM00841 from=89 to=145 evalue=4.2e-18 interpro_id=IPR015365 interpro_description=Elongation factor P, C-terminal)
EFP (db=HMMPfam db_id=PF01132 from=28 to=81 evalue=2.1e-17 interpro_id=IPR001059 interpro_description=Translation elongation factor P/YeiP, central GO=Molecular Function: translation elongation factor activity (GO:0003746), Biological Process: translational elongation (GO:0006414))
Displaying 4 items

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