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NECEvent2014_7_2_scaffold_205

Alias: 177_002_scaffold_205

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_7_2_scaffold_205_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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44..760
DNA (717bp) protein (239aa)
Aerobic respiration control protein ArcA n=1411 Tax=Enterobacteriaceae RepID=ARCA_ECO57 rbh
aerobic respiration control protein ArcA
Two-component system response regulator {ECO:0000313|EMBL:EFE60560.2}; TaxID=550672 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source
NECEvent2014_7_2_scaffold_205_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(820..2172)
DNA (1353bp) protein (451aa)
Colicin E2 tolerance protein n=147 Tax=Enterobacteriaceae RepID=B6I6P8_ECOSE rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EZE10280.1}; TaxID=1446753 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
NECEvent2014_7_2_scaffold_205_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2230..3654)
DNA (1425bp) protein (475aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1446580 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriac
CreC sensory histidine kinase n=189 Tax=Enterobacteriaceae RepID=C6EBH2_ECOBD rbh
sensor protein CreC
NECEvent2014_7_2_scaffold_205_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3654..4343)
DNA (690bp) protein (230aa)
DNA-binding response regulator CreB n=59 Tax=Escherichia RepID=B2N0A5_ECOLX rbh
creB; two-component response regulator
Transcriptional regulator {ECO:0000313|EMBL:KHG99140.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia col
NECEvent2014_7_2_scaffold_205_5
Shigella boydii, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4356..4829)
DNA (474bp) protein (158aa)
Protein CreA n=1407 Tax=Enterobacteriaceae RepID=CREA_ECO57 rbh
hypothetical protein
Protein CreA {ECO:0000256|PIRNR:PIRNR003174}; Catabolite regulation protein A {ECO:0000256|PIRNR:PIRNR003174}; TaxID=932676 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; E
NECEvent2014_7_2_scaffold_205_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5040..5909
DNA (870bp) protein (290aa)
Right origin-binding protein n=1075 Tax=Enterobacteriaceae RepID=ROB_ECO57 rbh
right origin-binding protein
Right origin-binding protein {ECO:0000313|EMBL:EFJ79840.1}; TaxID=749531 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherich
NECEvent2014_7_2_scaffold_205_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5906..6553)
DNA (648bp) protein (216aa)
phosphoglycerate mutase (EC:5.4.2.1)
Probable phosphoglycerate mutase GpmB {ECO:0000256|HAMAP-Rule:MF_01040, ECO:0000256|SAAS:SAAS00013984}; EC=5.4.2.- {ECO:0000256|HAMAP-Rule:MF_01040};; PGAM {ECO:0000256|HAMAP-Rule:MF_01040}; Phosphogl
Probable phosphoglycerate mutase GpmB n=978 Tax=Enterobacteriaceae RepID=GPMB_ECO24 rbh
NECEvent2014_7_2_scaffold_205_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6605..7117
DNA (513bp) protein (171aa)
Non-canonical purine NTP phosphatase {ECO:0000256|HAMAP-Rule:MF_00648}; EC=3.6.1.- {ECO:0000256|HAMAP-Rule:MF_00648};; Non-standard purine NTP phosphatase {ECO:0000256|HAMAP-Rule:MF_00648}; Nucleoside
Non-canonical purine NTP phosphatase n=155 Tax=Proteobacteria RepID=NCPP_ECO55 rbh
inosine/xanthosine triphosphatase
NECEvent2014_7_2_scaffold_205_9
Shigella dysenteriae, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7270..7566)
DNA (297bp) protein (99aa)
Trp operon repressor n=909 Tax=Proteobacteria RepID=TRPR_ECO24
Trp operon repressor
Trp operon repressor {ECO:0000256|HAMAP-Rule:MF_00475, ECO:0000256|SAAS:SAAS00234182}; TaxID=941429 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shige
NECEvent2014_7_2_scaffold_205_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7686..9623)
DNA (1938bp) protein (646aa)
Soluble lytic murein transglycosylase n=502 Tax=Enterobacteriaceae RepID=SLT_ECO57 rbh
Soluble lytic murein transglycosylase {ECO:0000313|EMBL:EGI43358.1}; TaxID=656408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="
slt; lytic murein transglycosylase
NECEvent2014_7_2_scaffold_205_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9834..11501
DNA (1668bp) protein (556aa)
Uncharacterized ABC transporter ATP-binding protein YjjK n=944 Tax=Enterobacteriaceae RepID=YJJK_ECO57 rbh
ABC transporter ATP-binding protein
ChvD family ATP-binding cassette protein {ECO:0000313|EMBL:ELI34947.1}; TaxID=1169376 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" sour
NECEvent2014_7_2_scaffold_205_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11808..13040)
DNA (1233bp) protein (411aa)
Transcriptional regulator nadR n=332 Tax=Escherichia RepID=E2QLF0_ECOLX rbh
nadR; nicotinamide-nucleotide adenylyltransferase
Trifunctional NAD biosynthesis/regulator protein NadR {ECO:0000313|EMBL:EQN17634.1}; TaxID=1280961 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escher
NECEvent2014_7_2_scaffold_205_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13061..14443)
DNA (1383bp) protein (461aa)
DNA repair protein radA n=1131 Tax=Enterobacteriaceae RepID=C3SE38_ECOLX rbh
radA; DNA repair protein RadA
DNA repair protein radA {ECO:0000256|RuleBase:RU003555}; TaxID=1268986 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia
NECEvent2014_7_2_scaffold_205_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14492..15460)
DNA (969bp) protein (323aa)
Phosphoserine phosphatase SerB n=1 Tax=Escherichia coli (strain ATCC 55124 / KO11) RepID=E8YEG7_ECOKO rbh
serB; phosphoserine phosphatase
3-phosphoserine phosphatase SerB {ECO:0000313|EMBL:BAI38961.1}; TaxID=585396 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Esche
NECEvent2014_7_2_scaffold_205_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15566..16210
DNA (645bp) protein (215aa)
Protein smp n=1 Tax=Escherichia coli BIDMC 19C RepID=U7CBJ5_ECOLX rbh
hypothetical protein
Protein smp {ECO:0000313|EMBL:EOW04921.1}; TaxID=1182698 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE98.;"
NECEvent2014_7_2_scaffold_205_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16238..17254
DNA (1017bp) protein (339aa)
lplA; lipoyl-protein ligase A (EC:2.7.7.63)
Lipoate-protein ligase A {ECO:0000256|HAMAP-Rule:MF_01602, ECO:0000256|SAAS:SAAS00214764}; EC=2.7.7.63 {ECO:0000256|HAMAP-Rule:MF_01602, ECO:0000256|SAAS:SAAS00026637};; Lipoate--protein ligase {ECO:0
Lipoate-protein ligase A n=47 Tax=Escherichia RepID=LPLA_ECOLC rbh
NECEvent2014_7_2_scaffold_205_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17286..17549
DNA (264bp) protein (88aa)
Helix-turn-helix domain protein n=377 Tax=Enterobacteriaceae RepID=B1IS34_ECOLC
hypothetical protein
Helix-turn-helix domain protein {ECO:0000313|EMBL:ACT30631.1}; TaxID=469008 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escher
NECEvent2014_7_2_scaffold_205_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17709..18428)
DNA (720bp) protein (240aa)
deoD; Purine nucleoside phosphorylase (EC:2.4.2.1)
Purine nucleoside phosphorylase DeoD-type {ECO:0000256|HAMAP-Rule:MF_01627}; Short=PNP {ECO:0000256|HAMAP-Rule:MF_01627};; EC=2.4.2.1 {ECO:0000256|HAMAP-Rule:MF_01627};; TaxID=1169354 species="Bacteri
Purine nucleoside phosphorylase DeoD-type n=3 Tax=Escherichia coli RepID=A1AJV1_ECOK1 rbh
NECEvent2014_7_2_scaffold_205_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18508..19731)
DNA (1224bp) protein (408aa)
phosphopentomutase (EC:5.4.2.7)
Phosphopentomutase {ECO:0000256|HAMAP-Rule:MF_00740, ECO:0000256|SAAS:SAAS00010015}; EC=5.4.2.7 {ECO:0000256|HAMAP-Rule:MF_00740, ECO:0000256|SAAS:SAAS00009998};; Phosphodeoxyribomutase {ECO:0000256|H
Phosphopentomutase n=1128 Tax=Enterobacteriaceae RepID=DEOB_ECO24 rbh
NECEvent2014_7_2_scaffold_205_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19783..21105)
DNA (1323bp) protein (441aa)
Thymidine phosphorylase {ECO:0000256|HAMAP-Rule:MF_01628, ECO:0000256|SAAS:SAAS00031984}; EC=2.4.2.4 {ECO:0000256|HAMAP-Rule:MF_01628, ECO:0000256|SAAS:SAAS00031985};; TdRPase {ECO:0000256|HAMAP-Rule:
Thymidine phosphorylase n=913 Tax=Enterobacteriaceae RepID=TYPH_ECO24 rbh
deoA; thymidine phosphorylase
NECEvent2014_7_2_scaffold_205_21
Escherichia sp. KTE159, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21232..22011)
DNA (780bp) protein (260aa)
deoxyribose-phosphate aldolase (EC:4.1.2.4)
Deoxyribose-phosphate aldolase {ECO:0000256|HAMAP-Rule:MF_00592, ECO:0000256|SAAS:SAAS00058202}; Short=DERA {ECO:0000256|HAMAP-Rule:MF_00592};; EC=4.1.2.4 {ECO:0000256|HAMAP-Rule:MF_00592, ECO:0000256
Deoxyribose-phosphate aldolase n=1003 Tax=Enterobacteriaceae RepID=DEOC_ECO24 rbh
NECEvent2014_7_2_scaffold_205_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22269..23819
DNA (1551bp) protein (517aa)
Uncharacterized protein n=77 Tax=Escherichia coli RepID=C8TQD4_ECO26 rbh
yjjI; hypothetical protein
YjjI family glycine radical enzyme {ECO:0000313|EMBL:EOV51537.1}; TaxID=1182671 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Es
NECEvent2014_7_2_scaffold_205_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23950..24654
DNA (705bp) protein (235aa)
Glycine radical enzyme activase, YjjW family n=42 Tax=Escherichia coli RepID=I3ABM3_ECOLX rbh
radical SAM superfamily protein
Uncharacterized protein {ECO:0000313|EMBL:BAI57852.1}; TaxID=431946 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia co
Displaying 23 items

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