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NECEvent2014_7_2_scaffold_146_30

Organism: NECEvent2014_7_2_Escherichia_coli_51_98_partial

partial RP 21 / 55 MC: 5 BSCG 20 / 51 MC: 2 ASCG 9 / 38 MC: 1
Location: comp(33576..34370)

Top 3 Functional Annotations

Value Algorithm Source
RHS repeat-associated core domain protein n=7 Tax=Escherichia coli RepID=N2EFN4_ECOLX similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 264.0
  • Bit_score: 566
  • Evalue 1.50e-158
putative truncated Rhs core protein similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 264.0
  • Bit_score: 566
  • Evalue 4.30e-159
Protein rhsC {ECO:0000313|EMBL:EOW01918.1}; TaxID=1182699 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE100. similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 264.0
  • Bit_score: 566
  • Evalue 2.20e-158

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Taxonomy

Escherichia coli → Escherichia → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 795
TACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAAGGGGCAACAGCGTGGTGCGCAGAATATGATGAATGGGGCAACCTGCTGAGTGATGAGAACCCGCATCATCTGCAGCAGCTCATTCGCCTGCCGGGTCAGCAGTATGATGAGGAGTCCGGCCTGTATTACAACCGCCACCGCTATTATGACCCGCTGCAGGGGCGGTATATCACTCAGGATCCGATTGGGCTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTGATATAAATTTATACCCCGAAAGTGATCTTATCCATTCTGTAGCTGATGAGATTAATATCCCAGGCGTTTTCACAATCGGGGGGCATGGTACCCCCACATCTATTGAATCCGCAACGCGCAGTATCATGACAGCTAAAGATCTAGCATATCTAATTAAATTTGATGGGAATTATAAAGATGGGATGACAGTTTGGTTATTTTCTTGTAATACAGGTAAAGGACAAAATTCATTTGCTAGCCAATTAGCTAAAGAGTTACATACAAATGTAATAGGACCTGACACGCTATGGACGTGGTGGGGGCGAGGAACTAATGGTAAGTTAAAAATGGATACAGTGCTAACAGCACCAACGAACCTTAATTCAAATAAGGATCTAATGGCTATAACAACAAAAGACCTTGGTAATTGGATAACATATGGGCCATCTGGGCACCCCATTTCTAATATGCAAGGTACGCCAGAAAAACCCAGTGATATAAGATAG
PROTEIN sequence
Length: 265
YHCDHRGLPLALISTEGATAWCAEYDEWGNLLSDENPHHLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVINVDPQGLVDINLYPESDLIHSVADEINIPGVFTIGGHGTPTSIESATRSIMTAKDLAYLIKFDGNYKDGMTVWLFSCNTGKGQNSFASQLAKELHTNVIGPDTLWTWWGRGTNGKLKMDTVLTAPTNLNSNKDLMAITTKDLGNWITYGPSGHPISNMQGTPEKPSDIR*