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NECEvent2014_5_5_scaffold_344

Alias: 175_004_scaffold_344

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_5_5_scaffold_344_1
Enterobacter sp. YD4, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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334..882
DNA (549bp) protein (183aa)
Protein YrdA n=1 Tax=Enterobacter radicincitans DSM 16656 RepID=J1QMC1_9ENTR
YrdA protein {ECO:0000313|EMBL:KIS45489.1}; TaxID=1544796 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter sp. YD4.;"
hypothetical protein
NECEvent2014_5_5_scaffold_344_2
Escherichia vulneris, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(864..1121)
DNA (258bp) protein (86aa)
hypothetical protein n=1 Tax=Enterobacter aerogenes RepID=UPI000364EF73
Uncharacterized protein {ECO:0000313|EMBL:GAL60459.1}; TaxID=1115515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia v
Protein of unknown function (DUF1488)
NECEvent2014_5_5_scaffold_344_3
Enterobacter sp. YD4, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1118..1936)
DNA (819bp) protein (273aa)
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00228653}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000
aroE; shikimate 5-dehydrogenase (EC:1.1.1.25)
Shikimate dehydrogenase n=25 Tax=Escherichia coli RepID=AROE_ECOL5 rbh
NECEvent2014_5_5_scaffold_344_4
Citrobacter koseri, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1941..2513)
DNA (573bp) protein (191aa)
Threonylcarbamoyl-AMP synthase {ECO:0000255|HAMAP-Rule:MF_01852}; Short=TC-AMP synthase {ECO:0000255|HAMAP-Rule:MF_01852};; EC=2.7.7.87 {ECO:0000255|HAMAP-Rule:MF_01852};; L-threonylcarbamoyladenylate
Threonylcarbamoyl-AMP synthase n=1 Tax=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) RepID=TSAC_CITK8 rbh
putative ribosome maturation factor
NECEvent2014_5_5_scaffold_344_5
Kosakonia radicincitans, Kosakonia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2503..3060)
DNA (558bp) protein (186aa)
Uncharacterized protein n=1 Tax=Enterobacter sp. R4-368 RepID=R9VR46_9ENTR rbh
Uncharacterized protein {ECO:0000313|EMBL:KDE33155.1}; TaxID=1455607 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Kosakonia.;" source="Kosakonia radic
hypothetical protein
NECEvent2014_5_5_scaffold_344_6
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3087..3560)
DNA (474bp) protein (158aa)
Protein Smg n=1 Tax=Citrobacter rodentium (strain ICC168) RepID=D2TNA3_CITRI rbh
smg; hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AKE60315.1}; TaxID=1261127 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter a
NECEvent2014_5_5_scaffold_344_7
Enterobacter sp. R4-368, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3532..4671)
DNA (1140bp) protein (380aa)
Uncharacterized protein n=1 Tax=Enterobacter sp. R4-368 RepID=R9VRE8_9ENTR rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGN86000.1}; TaxID=1166130 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter
NECEvent2014_5_5_scaffold_344_8
Trabulsiella guamensis, Trabulsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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4784..5293
DNA (510bp) protein (170aa)
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS0
PREDICTED: peptide deformylase-like n=1 Tax=Ceratitis capitata RepID=UPI000329F88B rbh
peptide deformylase
NECEvent2014_5_5_scaffold_344_9
Escherichia sp. KTE159, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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5308..6255
DNA (948bp) protein (316aa)
Methionyl-tRNA formyltransferase {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00043680}; EC=2.1.2.9 {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00150580};; TaxID=1182732 species="
fmt; methionyl-tRNA formyltransferase (EC:2.1.2.9)
Methionyl-tRNA formyltransferase n=2 Tax=Escherichia coli RepID=L2VK11_ECOLX
NECEvent2014_5_5_scaffold_344_10
Klebsiella oxytoca, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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6304..7593
DNA (1290bp) protein (430aa)
Ribosomal RNA small subunit methyltransferase B {ECO:0000256|HAMAP-Rule:MF_01856, ECO:0000256|SAAS:SAAS00013752}; EC=2.1.1.176 {ECO:0000256|HAMAP-Rule:MF_01856, ECO:0000256|SAAS:SAAS00011820};; 16S rR
Ribosomal RNA small subunit methyltransferase B n=1 Tax=Raoultella ornithinolytica B6 RepID=M9W7W7_RAOOR rbh
16S rRNA methyltransferase B
NECEvent2014_5_5_scaffold_344_11
Enterobacter sp. R4-368, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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7616..8992
DNA (1377bp) protein (459aa)
Potassium transporter peripheral membrane protein n=2 Tax=Enterobacteriaceae RepID=R9VLM4_9ENTR rbh
trkA; potassium transporter peripheral membrane component
Potassium transporter peripheral membrane protein {ECO:0000313|EMBL:AGN86004.1}; TaxID=1166130 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobact
NECEvent2014_5_5_scaffold_344_12
Enterobacter cloacae, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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9132..9545
DNA (414bp) protein (138aa)
Large-conductance mechanosensitive channel n=1 Tax=Enterobacter cloacae S611 RepID=V5AUK4_ENTCL
Large-conductance mechanosensitive channel {ECO:0000256|HAMAP-Rule:MF_00115, ECO:0000256|SAAS:SAAS00023935}; TaxID=1399146 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; En
mscL; large-conductance mechanosensitive channel
NECEvent2014_5_5_scaffold_344_13
Enterobacteriaceae bacterium strain FGI 57, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9546..9761)
DNA (216bp) protein (72aa)
Uncharacterized protein n=1 Tax=Enterobacteriaceae bacterium (strain FGI 57) RepID=L0LXZ4_ENTBF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB76478.1}; TaxID=693444 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae.;" source="Enterobacteriaceae bacteriu
NECEvent2014_5_5_scaffold_344_14
Enterobacter sp. R4-368, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9828..10244)
DNA (417bp) protein (139aa)
Zinc-responsive transcriptional regulator n=1 Tax=Enterobacter sp. R4-368 RepID=R9VMJ3_9ENTR
zntR; zinc-responsive transcriptional regulator
Zinc-responsive transcriptional regulator {ECO:0000313|EMBL:AGN86007.1}; TaxID=1166130 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" so
NECEvent2014_5_5_scaffold_344_15
Kosakonia radicincitans, Kosakonia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10247..10615)
DNA (369bp) protein (123aa)
hypothetical protein n=1 Tax=Escherichia sp. TW11588 RepID=UPI0002BA1E44
Uncharacterized protein {ECO:0000313|EMBL:EJI92784.1}; TaxID=1177180 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Kosakonia.;" source="Kosakonia radic
hypothetical protein
NECEvent2014_5_5_scaffold_344_16
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(10723..10905)
DNA (183bp) protein (61aa)
50S ribosomal protein L17 n=29 Tax=Enterobacteriaceae RepID=D2TN93_CITRI
rplQ; 50S ribosomal protein L17
50S ribosomal protein L17 {ECO:0000313|EMBL:AKE60325.1}; TaxID=1261127 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter
Displaying 16 items

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