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gwc2_scaffold_366

Alias: GWC2_PER_33_13_9

Search features with annotation key words

Displaying items 1-30 of 48 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GWC2_PER_33_13_9_1
Peregrinibacteria bacterium GW2011_GWA2_33_10, Peregrinibacteria, Bacteria

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comp(209..1018)
-----------------
DNA (810bp)
protein (270aa)
Uncharacterized protein {ECO:0000313|EMBL:KKP37443.1}; TaxID=1619054 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWA2_33_10.;"
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=24)
seg (db=Seg db_id=seg from=4 to=15)
GWC2_PER_33_13_9_2
RIFOXYA2_FULL_Peregrinibacteria_33_7_curated, Peregrinibacteria, Bacteria

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comp(1161..1463)
-----------------
DNA (303bp)
protein (101aa)
Uncharacterized protein n=1 Tax=Archaeoglobus sulfaticallidus PM70-1 RepID=N0BN99_9EURY
hypothetical protein Tax=RIFOXYA2_FULL_Peregrinibacteria_33_7_curated
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=24)
GWC2_PER_33_13_9_3
RIFOXYA2_FULL_Peregrinibacteria_33_7_curated, Peregrinibacteria, Bacteria

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comp(1536..2327)
-----------------
DNA (792bp)
protein (264aa)
transmembrane_regions Tax=RIFOXYA2_FULL_Peregrinibacteria_33_7_curated
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
seg (db=Seg db_id=seg from=11 to=29)
GWC2_PER_33_13_9_4
RIFOXYA2_FULL_Peregrinibacteria_33_7_curated, Peregrinibacteria, Bacteria

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2552..4285
-----------------
DNA (1734bp)
protein (578aa)
tail-specific protease (EC:3.4.21.-); K03797 carboxyl-terminal processing protease [EC:3.4.21.102] Tax=RIFOXYA2_FULL_Peregrinibacteria_33_7_curated
tail-specific protease (EC:3.4.21.-)
Tail-specific protease n=1 Tax=Clostridium tetani (strain Massachusetts / E88) RepID=Q890X6_CLOTE
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
GWC2_PER_33_13_9_5
RIFOXYA2_FULL_Peregrinibacteria_33_7_curated, Peregrinibacteria, Bacteria

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4321..6372
-----------------
DNA (2052bp)
protein (684aa)
seg Tax=RIFOXYA2_FULL_Peregrinibacteria_33_7_curated
seg (db=Seg db_id=seg from=603 to=613)
GWC2_PER_33_13_9_6
Peregrinibacteria bacterium GW2011_GWA2_33_10, Peregrinibacteria, Bacteria

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comp(6458..8656)
-----------------
DNA (2199bp)
protein (733aa)
Type IV secretory pathway VirB4 components-like protein n=3 Tax=candidate division TM7 genomosp. GTL1 RepID=A5KS14_9BACT rbh
Type IV secretory pathway VirB4 component-like protein {ECO:0000313|EMBL:KKP37438.1}; TaxID=1619054 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWA2_33_10.;"
conjugal transfer protein TraC
(db=HMMPfam db_id=PF03135 from=189 to=324 evalue=0.00013 interpro_id=IPR018145 interpro_description=CagE, TrbE, VirB component of type IV transporter system, central domain GO=Molecular Function: ATP binding (GO:0005524))
GWC2_PER_33_13_9_7
Peregrinibacteria bacterium GW2011_GWA2_33_10, Peregrinibacteria, Bacteria

Not on your lists

8805..9434
-----------------
DNA (630bp)
protein (210aa)
Uncharacterized protein {ECO:0000313|EMBL:KKP37437.1}; TaxID=1619054 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWA2_33_10.;"
GWC2_PER_33_13_9_8
Peregrinibacteria bacterium GW2011_GWC2_33_13, Peregrinibacteria, Bacteria

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comp(9454..9900)
-----------------
DNA (447bp)
protein (149aa)
Peptide methionine sulfoxide reductase MsrB/MsrA, peptide methionine sulfoxide reductase msrA/msrB {ECO:0000313|EMBL:KKP39587.1}; EC=1.8.4.11 {ECO:0000313|EMBL:KKP39587.1};; EC=1.8.4.12 {ECO:0000313|E
msrAB; peptide methionine sulfoxide reductase MsrB/MsrA (EC:1.8.4.12 1.8.4.11)
Methionine-R-sulfoxide reductase/methionine-S-sulfoxide reductase n=1 Tax=Desulfobacter postgatei 2ac9 RepID=I5B462_9DELT
seg (db=Seg db_id=seg from=68 to=79)
GWC2_PER_33_13_9_9
RIFOXYA2_FULL_Peregrinibacteria_33_7_curated, Peregrinibacteria, Bacteria

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10080..10634
-----------------
DNA (555bp)
protein (185aa)
Nuclease (SNase domain protein) n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5UQ99_ROSS1
nuclease Tax=RIFOXYA2_FULL_Peregrinibacteria_33_7_curated
nuclease
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=32)
GWC2_PER_33_13_9_10
RIFOXYA2_FULL_Peregrinibacteria_33_7_curated, Peregrinibacteria, Bacteria

Not on your lists

10728..11753
-----------------
DNA (1026bp)
protein (342aa)
seg Tax=RIFOXYA2_FULL_Peregrinibacteria_33_7_curated
seg (db=Seg db_id=seg from=12 to=26)
GWC2_PER_33_13_9_11
Peregrinibacteria bacterium GW2011_GWC2_33_13, Peregrinibacteria, Bacteria

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comp(11737..12924)
-----------------
DNA (1188bp)
protein (396aa)
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase, phosphopantothenoylcysteine decarboxylase / phosphopantothenate-cysteine ligase {ECO:0000313|EMBL:KKP39590.1}; EC=4.1.1.3
phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase (EC:6.3.2.5)
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase n=1 Tax=Clostridium cellulovorans (strain ATCC 35296 / DSM 3052 / OCM 3 / 743B) RepID=D9SL99_CLOC7 rbh
seg (db=Seg db_id=seg from=89 to=102)
GWC2_PER_33_13_9_12
RIFOXYA2_FULL_Peregrinibacteria_33_7_curated, Peregrinibacteria, Bacteria

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comp(12943..13701)
-----------------
DNA (759bp)
protein (253aa)
ketopantoate hydroxymethyltransferase (EC:2.1.2.11); K00606 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11] Tax=RIFOXYA2_FULL_Peregrinibacteria_33_7_curated
ketopantoate hydroxymethyltransferase (EC:2.1.2.11)
3-methyl-2-oxobutanoate hydroxymethyltransferase n=1 Tax=Acetohalobium arabaticum (strain ATCC 49924 / DSM 5501 / Z-7288) RepID=D9QSX7_ACEAZ
no description (db=Gene3D db_id=G3DSA:3.20.20.60 from=2 to=252 evalue=1.1e-78 interpro_id=IPR015813 interpro_description=Pyruvate/Phosphoenolpyruvate kinase GO=Molecular Function: catalytic activity (GO:0003824))
GWC2_PER_33_13_9_13
RIFOXYA2_FULL_Peregrinibacteria_33_7_curated, Peregrinibacteria, Bacteria

Not on your lists

comp(13711..14253)
-----------------
DNA (543bp)
protein (181aa)
transmembrane_regions Tax=RIFOXYA2_FULL_Peregrinibacteria_33_7_curated
transmembrane_regions (db=TMHMM db_id=tmhmm from=36 to=55)
seg (db=Seg db_id=seg from=38 to=55)
GWC2_PER_33_13_9_14
RIFOXYA2_FULL_Peregrinibacteria_33_7_curated, Peregrinibacteria, Bacteria

Not on your lists

comp(14353..15210)
-----------------
DNA (858bp)
protein (286aa)
pantothenate kinase; K09680 type II pantothenate kinase [EC:2.7.1.33] Tax=RIFOXYA2_FULL_Peregrinibacteria_33_7_curated
ATPase BadF/BadG/BcrA/BcrD type n=1 Tax=Korarchaeum cryptofilum (strain OPF8) RepID=B1L7B5_KORCO
pantothenate kinase
seg (db=Seg db_id=seg from=136 to=148)
GWC2_PER_33_13_9_15
RIFOXYA2_FULL_Peregrinibacteria_33_7_curated, Peregrinibacteria, Bacteria

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15446..17521
-----------------
DNA (2076bp)
protein (692aa)
K(+)-insensitive pyrophosphate-energized proton pump n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KUW2_METHD rbh
vacuolar-type H(+)-translocating pyrophosphatase Tax=RIFOXYA2_FULL_Peregrinibacteria_33_7_curated
vacuolar-type H(+)-translocating pyrophosphatase
transmembrane_regions (db=TMHMM db_id=tmhmm from=4 to=26)
GWC2_PER_33_13_9_16
RIFOXYA2_FULL_Peregrinibacteria_33_7_curated, Peregrinibacteria, Bacteria

Not on your lists

17552..17788
-----------------
DNA (237bp)
protein (79aa)
id=5091324 Tax=RIFOXYA2_FULL_Peregrinibacteria_33_7_curated
GWC2_PER_33_13_9_17
RIFOXYA2_FULL_Peregrinibacteria_33_7_curated, Peregrinibacteria, Bacteria

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17862..19307
-----------------
DNA (1446bp)
protein (482aa)
Probable poly(Beta-D-mannuronate) O-acetylase n=1 Tax=Clostridium botulinum C str. Eklund RepID=B1BAU6_CLOBO rbh
algI; alginate O-acetylation protein Tax=RIFOXYA2_FULL_Peregrinibacteria_33_7_curated
algI; alginate O-acetylation protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=22)
GWC2_PER_33_13_9_18
RIFOXYA2_FULL_Peregrinibacteria_33_7_curated, Peregrinibacteria, Bacteria

Not on your lists

19314..20246
-----------------
DNA (933bp)
protein (311aa)
transmembrane_regions Tax=RIFOXYA2_FULL_Peregrinibacteria_33_7_curated
transmembrane_regions (db=TMHMM db_id=tmhmm from=9 to=31)
seg (db=Seg db_id=seg from=8 to=25)
GWC2_PER_33_13_9_19
Peregrinibacteria bacterium GW2011_GWA2_33_10, Peregrinibacteria, Bacteria

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comp(20243..21361)
-----------------
DNA (1119bp)
protein (373aa)
Putative uncharacterized protein n=1 Tax=Thermincola potens (strain JR) RepID=D5XAQ5_THEPJ
Uncharacterized protein {ECO:0000313|EMBL:KKP37425.1}; TaxID=1619054 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWA2_33_10.;"
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=9 to=31)
GWC2_PER_33_13_9_20
RIFOXYA2_FULL_Peregrinibacteria_33_7_curated, Peregrinibacteria, Bacteria

Not on your lists


comp(21498..22142)
-----------------
DNA (645bp)
protein (215aa)
50S ribosomal protein L25 n=1 Tax=Staphylococcus massiliensis S46 RepID=K9AU82_9STAP
rplY; 50S ribosomal protein L25; K02897 large subunit ribosomal protein L25 Tax=RIFOXYA2_FULL_Peregrinibacteria_33_7_curated
rplY; 50S ribosomal protein L25
seg (db=Seg db_id=seg from=64 to=72)
GWC2_PER_33_13_9_21
RIFOXYA2_FULL_Peregrinibacteria_33_7_curated, Peregrinibacteria, Bacteria

Not on your lists

22276..22578
-----------------
DNA (303bp)
protein (101aa)
Uncharacterised protein family UPF0133 Tax=RIFOXYA2_FULL_Peregrinibacteria_33_7_curated
seg (db=Seg db_id=seg from=10 to=22)
(db=HMMPfam db_id=PF02575 from=6 to=92 evalue=1.4e-17 interpro_id=IPR004401 interpro_description=Uncharacterised protein family UPF0133)
YbaB-like (db=superfamily db_id=SSF82607 from=5 to=95 evalue=2.8e-15 interpro_id=IPR004401 interpro_description=Uncharacterised protein family UPF0133)
GWC2_PER_33_13_9_22
Peregrinibacteria bacterium GW2011_GWA2_33_10, Peregrinibacteria, Bacteria

Not on your lists

22588..23604
-----------------
DNA (1017bp)
protein (339aa)
Aminodeoxychorismate lyase n=1 Tax=Filifactor alocis (strain ATCC 35896 / D40 B5) RepID=D6GSE8_FILAD
Aminodeoxychorismate lyase {ECO:0000313|EMBL:KKP37422.1}; TaxID=1619054 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWA2_33_10.;"
aminodeoxychorismate lyase
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=32)
GWC2_PER_33_13_9_23
RIFOXYA2_FULL_Peregrinibacteria_33_7_curated, Peregrinibacteria, Bacteria

Not on your lists

comp(23608..24366)
-----------------
DNA (759bp)
protein (253aa)
transmembrane_regions Tax=RIFOXYA2_FULL_Peregrinibacteria_33_7_curated
transmembrane_regions (db=TMHMM db_id=tmhmm from=4 to=26)
seg (db=Seg db_id=seg from=4 to=22)
GWC2_PER_33_13_9_24
RIFOXYA2_FULL_Peregrinibacteria_33_7_curated, Peregrinibacteria, Bacteria

Not on your lists

comp(24469..25926)
-----------------
DNA (1458bp)
protein (486aa)
Chromosomal replication initiator protein DnaA n=3 Tax=Clostridium botulinum RepID=DNAA_CLOBA rbh
dnaA; chromosomal replication initiation protein; K02313 chromosomal replication initiator protein Tax=RIFOXYA2_FULL_Peregrinibacteria_33_7_curated
dnaA; chromosomal replication initiation protein
DNAA (db=PatternScan db_id=PS01008 from=443 to=462 evalue=0.0 interpro_id=IPR018312 interpro_description=Chromosomal replication control, initiator DnaA, conserved site GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA replication origin binding (GO:0003688), Molecular Function: ATP binding (GO:0005524), Biological Process: DNA-dependent DNA replication initiation (GO:0006270), Biological Process: regulation of DNA replication (GO:0006275))
GWC2_PER_33_13_9_25
RIFOXYA2_FULL_Peregrinibacteria_33_7_curated, Peregrinibacteria, Bacteria

Not on your lists

comp(25996..27636)
-----------------
DNA (1641bp)
protein (547aa)
putative membrane-associated Zn-dependent protease; K11749 regulator of sigma E protease [EC:3.4.24.-] Tax=RIFOXYA2_FULL_Peregrinibacteria_33_7_curated
Membrane-associated zinc metalloprotease, putative n=1 Tax=Flavobacteria bacterium BAL38 RepID=A3J3M9_9FLAO
membrane-associated Zn-dependent protease
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=27)
GWC2_PER_33_13_9_26
RIFOXYA2_FULL_Peregrinibacteria_33_7_curated, Peregrinibacteria, Bacteria

Not on your lists

comp(27660..28220)
-----------------
DNA (561bp)
protein (187aa)
Ribosome-recycling factor n=1 Tax=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) RepID=RRF_PELCD
frr; ribosome recycling factor; K02838 ribosome recycling factor Tax=RIFOXYA2_FULL_Peregrinibacteria_33_7_curated
frr; ribosome recycling factor
coiled-coil (db=Coil db_id=coil from=140 to=179 evalue=NA)
GWC2_PER_33_13_9_27
RIFOXYA2_FULL_Peregrinibacteria_33_7_curated, Peregrinibacteria, Bacteria

Not on your lists

comp(28257..28970)
-----------------
DNA (714bp)
protein (238aa)
pyrH; uridylate kinase (EC:2.7.4.-); K09903 uridylate kinase [EC:2.7.4.22] Tax=RIFOXYA2_FULL_Peregrinibacteria_33_7_curated
pyrH; uridylate kinase (EC:2.7.4.-)
Uridylate kinase n=1 Tax=Leptotrichia goodfellowii F0264 RepID=D0GP95_9FUSO
seg (db=Seg db_id=seg from=27 to=55)
GWC2_PER_33_13_9_28
RIFOXYA2_FULL_Peregrinibacteria_33_7_curated, Peregrinibacteria, Bacteria

Not on your lists

comp(29033..29440)
-----------------
DNA (408bp)
protein (136aa)
transmembrane_regions Tax=RIFOXYA2_FULL_Peregrinibacteria_33_7_curated
transmembrane_regions (db=TMHMM db_id=tmhmm from=114 to=133)
seg (db=Seg db_id=seg from=40 to=49)
GWC2_PER_33_13_9_29
Peregrinibacteria bacterium GW2011_GWC2_33_13, Peregrinibacteria, Bacteria

Not on your lists

comp(29528..30583)
-----------------
DNA (1056bp)
protein (352aa)
Twitching motility protein n=1 Tax=Desulfotomaculum carboxydivorans (strain DSM 14880 / VKM B-2319 / CO-1-SRB) RepID=F6BA52_DESCC rbh
Twitching motility protein, twitching motility protein PilT {ECO:0000313|EMBL:KKP39608.1}; TaxID=1619061 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWC2_33_13.;
twitching motility protein
T2SP_E (db=PatternScan db_id=PS00662 from=195 to=209 evalue=0.0 interpro_id=IPR001482 interpro_description=Type II secretion system protein E GO=Molecular Function: ATP binding (GO:0005524), Cellular Component: intracellular (GO:0005622), Biological Process: transport (GO:0006810))
GWC2_PER_33_13_9_30
RIFOXYA2_FULL_Peregrinibacteria_33_7_curated, Peregrinibacteria, Bacteria

Not on your lists

comp(30649..31818)
-----------------
DNA (1170bp)
protein (390aa)
id=5091338 Tax=RIFOXYA2_FULL_Peregrinibacteria_33_7_curated
Displaying items 1-30 of 48 in total

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