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gwc2_scaffold_1520

Alias: GWC2_PER_33_13_18

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GWC2_PER_33_13_18_1
Peregrinibacteria bacterium GW2011_GWA2_33_10, Peregrinibacteria, Bacteria

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167..790
-----------------
DNA (624bp)
protein (208aa)
formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase (EC:2.1.2.2)
Phosphoribosylglycinamide formyltransferase n=1 Tax=Clostridium colicanis 209318 RepID=N9WET7_9CLOT
Formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase {ECO:0000313|EMBL:KKP36624.1}; TaxID=1619054 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW
PHOSPHORIBOSYLGLYCINAMIDE FORMYLTRANSFERASE (db=HMMPanther db_id=PTHR10520:SF9 from=83 to=201 evalue=1.7e-41)
GWC2_PER_33_13_18_2
Peregrinibacteria bacterium GW2011_GWC2_33_13, Peregrinibacteria, Bacteria

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815..1597
-----------------
DNA (783bp)
protein (261aa)
Shikimate 5-dehydrogenase, shikimate dehydrogenase {ECO:0000313|EMBL:KKP38475.1}; EC=1.1.1.25 {ECO:0000313|EMBL:KKP38475.1};; TaxID=1619061 species="Bacteria; Peregrinibacteria.;" source="Peregrinibac
aroE; shikimate 5-dehydrogenase (EC:1.1.1.25)
Shikimate dehydrogenase n=1 Tax=Pyrococcus abyssi (strain GE5 / Orsay) RepID=AROE_PYRAB
seg (db=Seg db_id=seg from=106 to=136)
GWC2_PER_33_13_18_3
Peregrinibacteria bacterium GW2011_GWA2_33_10, Peregrinibacteria, Bacteria

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comp(1878..2615)
-----------------
DNA (738bp)
protein (246aa)
Acetyltransferase {ECO:0000313|EMBL:KKP36622.1}; TaxID=1619054 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWA2_33_10.;"
N-TERMINAL ACETYLTRANSFERASE (db=HMMPanther db_id=PTHR23091 from=118 to=235 evalue=0.00013)
Acyl-CoA N-acyltransferases (Nat) (db=superfamily db_id=SSF55729 from=101 to=244 evalue=2.2e-17 interpro_id=IPR016181 interpro_description=Acyl-CoA N-acyltransferase)
no description (db=Gene3D db_id=G3DSA:3.40.630.30 from=106 to=238 evalue=5.5e-13 interpro_id=IPR016181 interpro_description=Acyl-CoA N-acyltransferase)
GWC2_PER_33_13_18_4
Peregrinibacteria bacterium GW2011_GWC2_33_13, Peregrinibacteria, Bacteria

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comp(2943..3833)
-----------------
DNA (891bp)
protein (297aa)
Methyltransferase type 11 n=1 Tax=Calothrix sp. PCC 7507 RepID=K9PH57_9CYAN
Methyltransferase {ECO:0000313|EMBL:KKP38477.1}; TaxID=1619061 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWC2_33_13.;"
type 11 methyltransferase
seg (db=Seg db_id=seg from=71 to=82)
GWC2_PER_33_13_18_5
Peregrinibacteria bacterium GW2011_GWC2_33_13, Peregrinibacteria, Bacteria

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comp(3853..4614)
-----------------
DNA (762bp)
protein (254aa)
SPFH domain / Band 7 family protein n=2 Tax=Salinibacter ruber RepID=Q2S1U3_SALRD
Stomatin-like protein transmembrane protein {ECO:0000313|EMBL:KKP38478.1}; TaxID=1619061 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWC2_33_13.;"
stomatin-like protein transmembrane protein
seg (db=Seg db_id=seg from=7 to=20)
GWC2_PER_33_13_18_6
Peregrinibacteria bacterium GW2011_GWC2_33_13, Peregrinibacteria, Bacteria

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4757..8713
-----------------
DNA (3957bp)
protein (1319aa)
Hypothetical product, predicted lipoprotein n=1 Tax=Mycoplasma agalactiae (strain 5632) RepID=D3VRC8_MYCA6
Uncharacterized protein {ECO:0000313|EMBL:KKP38479.1}; TaxID=1619061 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWC2_33_13.;"
hypothetical protein
coiled-coil (db=Coil db_id=coil from=37 to=58 evalue=NA)
GWC2_PER_33_13_18_7
Peregrinibacteria bacterium GW2011_GWC2_33_13, Peregrinibacteria, Bacteria

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8730..9890
-----------------
DNA (1161bp)
protein (387aa)
MscS Mechanosensitive ion channel n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JYK0_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KKP38480.1}; TaxID=1619061 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWC2_33_13.;"
hypothetical protein
seg (db=Seg db_id=seg from=47 to=60)
GWC2_PER_33_13_18_8
RIFOXYA2_FULL_Peregrinibacteria_33_7_curated, Peregrinibacteria, Bacteria

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10848..11543
-----------------
DNA (696bp)
protein (232aa)
Uncharacterized protein n=2 Tax=Bdellovibrio bacteriovorus RepID=K7Z904_BDEBC
hypothetical protein Tax=RIFOXYA2_FULL_Peregrinibacteria_33_7_curated
hypothetical protein
seg (db=Seg db_id=seg from=113 to=123)
GWC2_PER_33_13_18_9
Peregrinibacteria bacterium GW2011_GWA2_33_10, Peregrinibacteria, Bacteria

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11637..12158
-----------------
DNA (522bp)
protein (174aa)
Putative intracellular protease/amidase n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KZW2_METHD
ThiJ/PfpI domain protein {ECO:0000313|EMBL:KKP36615.1}; TaxID=1619054 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWA2_33_10.;"
putative intracellular protease/amidase
THIJ/PFPI (db=HMMPanther db_id=PTHR11019 from=39 to=171 evalue=4.2e-27)
GWC2_PER_33_13_18_10
RIFOXYA2_FULL_Peregrinibacteria_33_7_curated, Peregrinibacteria, Bacteria

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12411..13073
-----------------
DNA (663bp)
protein (221aa)
30S ribosomal protein S6 n=1 Tax=Melioribacter roseus (strain P3M) RepID=I6ZST3_MELRP
30S ribosomal protein S6 Tax=RIFOXYA2_FULL_Peregrinibacteria_33_7_curated
30S ribosomal protein S6
coiled-coil (db=Coil db_id=coil from=178 to=216 evalue=NA)
GWC2_PER_33_13_18_11
Peregrinibacteria bacterium GW2011_GWA2_33_10, Peregrinibacteria, Bacteria

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13101..13550
-----------------
DNA (450bp)
protein (150aa)
Single-stranded DNA-binding protein n=1 Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8MY37_ANATU
Single-stranded DNA-binding protein {ECO:0000313|EMBL:KKP36613.1}; TaxID=1619054 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWA2_33_10.;"
hypothetical protein
SINGLE-STRANDED DNA-BINDING PROTEIN, SSB (db=HMMPanther db_id=PTHR10302 from=36 to=149 evalue=1.4e-20 interpro_id=IPR011344 interpro_description=Single-strand DNA-binding GO=Molecular Function: single-stranded DNA binding (GO:0003697), Biological Process: DNA replication (GO:0006260))
GWC2_PER_33_13_18_12
RIFOXYA2_FULL_Peregrinibacteria_33_7_curated, Peregrinibacteria, Bacteria

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13570..13806
-----------------
DNA (237bp)
protein (79aa)
30S ribosomal protein S18 n=2 Tax=Slackia RepID=C7N447_SLAHD
30S ribosomal protein S18P; K02963 small subunit ribosomal protein S18 Tax=RIFOXYA2_FULL_Peregrinibacteria_33_7_curated
30S ribosomal protein S18P
seg (db=Seg db_id=seg from=4 to=15)
GWC2_PER_33_13_18_13
RIFOXYA2_FULL_Peregrinibacteria_33_7_curated, Peregrinibacteria, Bacteria

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13866..14534
-----------------
DNA (669bp)
protein (223aa)
HAD-superfamily hydrolase, subfamily IA, variant 3 n=1 Tax=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) RepID=A9KKN8_CLOPH
HAD family hydrolase Tax=RIFOXYA2_FULL_Peregrinibacteria_33_7_curated
HAD family hydrolase
seg (db=Seg db_id=seg from=90 to=102)
GWC2_PER_33_13_18_14
RIFOXYA2_FULL_Peregrinibacteria_33_7_curated, Peregrinibacteria, Bacteria

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14521..15630
-----------------
DNA (1110bp)
protein (370aa)
proB; glutamate 5-kinase (EC:2.7.2.11); K00931 glutamate 5-kinase [EC:2.7.2.11] Tax=RIFOXYA2_FULL_Peregrinibacteria_33_7_curated
proB; glutamate 5-kinase (EC:2.7.2.11)
Glutamate 5-kinase n=3 Tax=Clostridium botulinum RepID=F4A6R2_CLOBO rbh
seg (db=Seg db_id=seg from=25 to=40)
GWC2_PER_33_13_18_15
RIFOXYA2_FULL_Peregrinibacteria_33_7_curated, Peregrinibacteria, Bacteria

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15905..16444
-----------------
DNA (540bp)
protein (180aa)
seg Tax=RIFOXYA2_FULL_Peregrinibacteria_33_7_curated
seg (db=Seg db_id=seg from=89 to=102)
transmembrane_regions (db=TMHMM db_id=tmhmm from=45 to=63)
GWC2_PER_33_13_18_16
RIFOXYA2_FULL_Peregrinibacteria_33_7_curated, Peregrinibacteria, Bacteria

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16456..18423
-----------------
DNA (1968bp)
protein (656aa)
coiled-coil Tax=RIFOXYA2_FULL_Peregrinibacteria_33_7_curated
coiled-coil (db=Coil db_id=coil from=180 to=201 evalue=NA)
seg (db=Seg db_id=seg from=285 to=299)
GWC2_PER_33_13_18_17
RIFOXYA2_FULL_Peregrinibacteria_33_7_curated, Peregrinibacteria, Bacteria

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18437..20071
-----------------
DNA (1635bp)
protein (545aa)
coiled-coil Tax=RIFOXYA2_FULL_Peregrinibacteria_33_7_curated
coiled-coil (db=Coil db_id=coil from=124 to=145 evalue=NA)
seg (db=Seg db_id=seg from=129 to=142)
GWC2_PER_33_13_18_18
Peregrinibacteria bacterium GW2011_GWA2_33_10, Peregrinibacteria, Bacteria

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20080..22608
-----------------
DNA (2529bp)
protein (843aa)
Uncharacterized protein {ECO:0000313|EMBL:KKP36606.1}; TaxID=1619054 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWA2_33_10.;"
coiled-coil (db=Coil db_id=coil from=226 to=247 evalue=NA)
seg (db=Seg db_id=seg from=2 to=15)
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=35)
GWC2_PER_33_13_18_19
Peregrinibacteria bacterium GW2011_GWA2_33_10, Peregrinibacteria, Bacteria

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22641..26390
-----------------
DNA (3750bp)
protein (1250aa)
Uncharacterized protein {ECO:0000313|EMBL:KKP36605.1}; TaxID=1619054 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWA2_33_10.;"
coiled-coil (db=Coil db_id=coil from=34 to=55 evalue=NA)
seg (db=Seg db_id=seg from=583 to=609)
GWC2_PER_33_13_18_20
Peregrinibacteria bacterium GW2011_GWA2_33_10, Peregrinibacteria, Bacteria

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comp(26399..28159)
-----------------
DNA (1761bp)
protein (587aa)
thrS; threonyl-tRNA synthetase (EC:6.1.1.3)
Threonine--tRNA ligase n=1 Tax=Caloramator australicus RC3 RepID=I7LI82_9CLOT rbh
Threonine-tRNA ligase {ECO:0000313|EMBL:KKP36604.1}; TaxID=1619054 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWA2_33_10.;"
coiled-coil (db=Coil db_id=coil from=503 to=524 evalue=NA)
Displaying 20 items

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