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gwc2_scaffold_9115

Alias: GWC2_PER_33_13_23

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GWC2_PER_33_13_23_1
Peregrinibacteria bacterium GW2011_GWA2_33_10, Peregrinibacteria, Bacteria

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173..1153
-----------------
DNA (981bp)
protein (327aa)
Uncharacterized protein {ECO:0000313|EMBL:KKP35693.1}; TaxID=1619054 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWA2_33_10.;"
seg (db=Seg db_id=seg from=16 to=27)
GWC2_PER_33_13_23_2
Peregrinibacteria bacterium GW2011_GWA2_33_10, Peregrinibacteria, Bacteria

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comp(1156..3270)
-----------------
DNA (2115bp)
protein (705aa)
S-layer domain protein n=1 Tax=Paenibacillus sp. (strain JDR-2) RepID=C6CXU5_PAESJ
S-layer domain protein {ECO:0000313|EMBL:KKP35694.1}; TaxID=1619054 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWA2_33_10.;"
S-layer protein
seg (db=Seg db_id=seg from=9 to=22)
GWC2_PER_33_13_23_3
RIFOXYA2_FULL_Peregrinibacteria_33_7_curated, Peregrinibacteria, Bacteria

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comp(3408..3869)
-----------------
DNA (462bp)
protein (154aa)
Ribosomal RNA large subunit methyltransferase H n=1 Tax=Belliella baltica (strain DSM 15883 / CIP 108006 / LMG 21964 / BA134) RepID=I3Z3N5_BELBD
hypothetical protein Tax=RIFOXYA2_FULL_Peregrinibacteria_33_7_curated
hypothetical protein
coiled-coil (db=Coil db_id=coil from=44 to=65 evalue=NA)
GWC2_PER_33_13_23_4
RIFOXYA2_FULL_Peregrinibacteria_33_7_curated, Peregrinibacteria, Bacteria

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3963..5357
-----------------
DNA (1395bp)
protein (465aa)
SAM-dependent methyltransferase; K03215 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190] Tax=RIFOXYA2_FULL_Peregrinibacteria_33_7_curated
RNA methyltransferase, TrmA family n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XR29_9BACT rbh
SAM-dependent methyltransferase
seg (db=Seg db_id=seg from=169 to=181)
GWC2_PER_33_13_23_5
RIFOXYA2_FULL_Peregrinibacteria_33_7_curated, Peregrinibacteria, Bacteria

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comp(5494..5796)
-----------------
DNA (303bp)
protein (101aa)
UPI0001E2D967 related cluster n=1 Tax=unknown RepID=UPI0001E2D967
methylated-DNA--protein-cysteine methyltransferase Tax=RIFOXYA2_FULL_Peregrinibacteria_33_7_curated
methylated-DNA--protein-cysteine methyltransferase
MGMT (db=PatternScan db_id=PS00374 from=50 to=56 evalue=0.0 interpro_id=IPR001497 interpro_description=Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO=Molecular Function: methylated-DNA-[protein]-cysteine S-methyltransferase activity (GO:0003908), Biological Process: DNA repair (GO:0006281))
GWC2_PER_33_13_23_6
RIFOXYA2_FULL_Peregrinibacteria_33_7_curated, Peregrinibacteria, Bacteria

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comp(5837..7150)
-----------------
DNA (1314bp)
protein (438aa)
metal dependent phosphohydrolase n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI0001744BED rbh
polynucleotide adenylyltransferase/metal dependent phosphohydrolase Tax=RIFOXYA2_FULL_Peregrinibacteria_33_7_curated
polynucleotide adenylyltransferase/metal dependent phosphohydrolase
Poly A polymerase C-terminal region-like (db=superfamily db_id=SSF81891 from=139 to=429 evalue=1.3e-52)
GWC2_PER_33_13_23_7
Peregrinibacteria bacterium GW2011_GWA2_33_10, Peregrinibacteria, Bacteria

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comp(7346..8575)
-----------------
DNA (1230bp)
protein (410aa)
Uncharacterized protein {ECO:0000313|EMBL:KKP35699.1}; TaxID=1619054 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWA2_33_10.;"
seg (db=Seg db_id=seg from=3 to=14)
GWC2_PER_33_13_23_8
RIFOXYA2_FULL_Peregrinibacteria_33_7_curated, Peregrinibacteria, Bacteria

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8779..9792
-----------------
DNA (1014bp)
protein (338aa)
glycoprotease family metalloendopeptidase; K01409 O-sialoglycoprotein endopeptidase [EC:3.4.24.57] Tax=RIFOXYA2_FULL_Peregrinibacteria_33_7_curated
Probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp n=1 Tax=Halanaerobium sp. (strain sapolanicus) RepID=E4RJ53_HALSL rbh
glycoprotease family metalloendopeptidase
bact_gcp: putative glycoprotease GCP (db=HMMTigr db_id=TIGR03723 from=3 to=320 evalue=1.9e-171 interpro_id=IPR022450 interpro_description=Peptidase M22, O-sialoglycoprotein peptidase GO=Molecular Function: metalloendopeptidase activity (GO:0004222))
Displaying 8 items

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