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gwf2_scaffold_1292_23 Annotations

Value Algorithm Source Identity Coverage Bit score Evalue Cross references
RNA polymerase, sigma-24 subunit, ECF subfamily n=3 Tax=Desulfitobacterium hafniense RepID=B8FZ92_DESHD similarity UNIREF
DB: UNIREF90 		32.0 0.0 104 3.00e+00 dor:Desor_3727
sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFOXYA2_FULL_Peregrinibacteria_33_21_curated UNIPROT
DB: UniProtKB 		100.0 190.0 379 2.70e-102 ggdbv1_89392341
sigma-70 family RNA polymerase sigma factor similarity KEGG
DB: KEGG 		34.4 180.0 103 7.50e-20 dor:Desor_3727
coiled-coil (db=Coil db_id=coil from=5 to=26 evalue=NA) iprscan interpro
DB: Coil 		0.0 0.0 0 0.0 dor:Desor_3727
no description (db=Gene3D db_id=G3DSA:1.10.1740.10 from=14 to=97 evalue=1.2e-11) iprscan interpro
DB: Gene3D 		0.0 0.0 0 1.00e+00 dor:Desor_3727
Sigma3 and sigma4 domains of RNA polymerase sigma factors (db=superfamily db_id=SSF88659 from=114 to=184 evalue=1.2e-13 interpro_id=IPR013324 interpro_description=RNA polymerase sigma factor, region 3/4 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Funct iprscan interpro
DB: superfamily 		0.0 0.0 0 1.00e+00 dor:Desor_3727
sigma70-ECF: RNA polymerase sigma factor, (db=HMMTigr db_id=TIGR02937 from=25 to=182 evalue=1.8e-36 interpro_id=IPR014284 interpro_description=RNA polymerase sigma-70 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:00169 iprscan interpro
DB: HMMTigr 		0.0 0.0 0 1.00e+00 dor:Desor_3727
(db=HMMPfam db_id=PF08281 from=126 to=178 evalue=1.4e-10 interpro_id=IPR013249 interpro_description=RNA polymerase sigma factor 70, region 4 type 2 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987)) iprscan interpro
DB: HMMPfam 		0.0 0.0 0 1.00e+00 dor:Desor_3727
Sigma2 domain of RNA polymerase sigma factors (db=superfamily db_id=SSF88946 from=4 to=118 evalue=3.4e-17 interpro_id=IPR013325 interpro_description=RNA polymerase sigma factor, region 2 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma facto iprscan interpro
DB: superfamily 		0.0 0.0 0 3.00e+00 dor:Desor_3727
(db=HMMPfam db_id=PF04542 from=28 to=96 evalue=3.9e-11 interpro_id=IPR007627 interpro_description=RNA polymerase sigma-70 region 2 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987)) iprscan interpro
DB: HMMPfam 		0.0 0.0 0 3.00e+00 dor:Desor_3727