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gwf2_scaffold_1414_18 Annotations

Value Algorithm Source Identity Coverage Bit score Evalue Cross references
Transcription termination factor NusA n=1 Tax=Thermosediminibacter oceani (strain ATCC BAA-1034 / DSM 16646 / JW/IW-1228P) RepID=D9S3L9_THEOJ rbh similarity UNIREF
DB: UNIREF90
48.0 0.0 329 1.00e+00 twi:Thewi_1352
Transcription termination factor NusA, N utilization substance protein A {ECO:0000313|EMBL:KKP39313.1}; TaxID=1619065 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011 UNIPROT
DB: UniProtKB
100.0 411.0 785 2.70e-224 A0A0F9Z6D9_9BACT
NusA antitermination factor similarity KEGG
DB: KEGG
48.8 342.0 329 1.10e-87 twi:Thewi_1352
coiled-coil (db=Coil db_id=coil from=325 to=346 evalue=NA) iprscan interpro
DB: Coil
0.0 0.0 0 0.0 twi:Thewi_1352
seg (db=Seg db_id=seg from=79 to=89) iprscan interpro
DB: Seg
0.0 0.0 0 0.0 twi:Thewi_1352
no description (db=Gene3D db_id=G3DSA:3.30.1480.10 from=1 to=136 evalue=1.3e-35 interpro_id=IPR013735 interpro_description=Transcription factor NusA, N-terminal GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: regulation of transcription termination, DNA-dependent (GO:0031554)) iprscan interpro
DB: Gene3D
0.0 0.0 0 1.00e+00 twi:Thewi_1352
no description (db=Gene3D db_id=G3DSA:3.30.300.20 from=215 to=293 evalue=1.3e-27 interpro_id=IPR015946 interpro_description=K homology domain-like, alpha/beta) iprscan interpro
DB: Gene3D
0.0 0.0 0 1.00e+00 twi:Thewi_1352
NusA: transcription termination factor NusA (db=HMMTigr db_id=TIGR01953 from=4 to=344 evalue=1.9e-130 interpro_id=IPR010213 interpro_description=Transcription termination factor NusA GO=Molecular Function: RNA binding (GO:0003723)) iprscan interpro
DB: HMMTigr
0.0 0.0 0 1.00e+00 twi:Thewi_1352
(db=HMMPfam db_id=PF08529 from=5 to=126 evalue=1.6e-35 interpro_id=IPR013735 interpro_description=Transcription factor NusA, N-terminal GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: regulation of transcription termination, DNA-dependent (GO:0031554)) iprscan interpro
DB: HMMPfam
0.0 0.0 0 1.00e+00 twi:Thewi_1352
TRANSCRIPTION TERMINATION FACTOR NUSA (db=HMMPanther db_id=PTHR22648 from=1 to=354 evalue=2.0e-102) iprscan interpro
DB: HMMPanther
0.0 0.0 0 2.00e+00 twi:Thewi_1352
no description (db=Gene3D db_id=G3DSA:2.40.50.140 from=152 to=214 evalue=2.0e-14 interpro_id=IPR012340 interpro_description=Nucleic acid-binding, OB-fold) iprscan interpro
DB: Gene3D
0.0 0.0 0 2.00e+00 twi:Thewi_1352
Nucleic acid-binding proteins (db=superfamily db_id=SSF50249 from=133 to=200 evalue=3.5e-15 interpro_id=IPR016027 interpro_description=Nucleic acid-binding, OB-fold-like) iprscan interpro
DB: superfamily
0.0 0.0 0 3.00e+00 twi:Thewi_1352
Transcription factor NusA, N-terminal domain (db=superfamily db_id=SSF69705 from=1 to=128 evalue=7.3e-34 interpro_id=IPR013735 interpro_description=Transcription factor NusA, N-terminal GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: regulation of transcription termination, DNA-dependent (GO:0031554)) iprscan interpro
DB: superfamily
0.0 0.0 0 7.00e+00 twi:Thewi_1352
Prokaryotic type KH domain (KH-domain type II) (db=superfamily db_id=SSF54814 from=201 to=278 evalue=8.3e-31 interpro_id=IPR009019 interpro_description=K Homology, prokaryotic type GO=Molecular Function: RNA binding (GO:0003723)) iprscan interpro
DB: superfamily
0.0 0.0 0 8.00e+00 twi:Thewi_1352
no description (db=HMMSmart db_id=SM00322 from=231 to=294 evalue=26.0 interpro_id=IPR004087 interpro_description=K Homology GO=Molecular Function: RNA binding (GO:0003723)) iprscan interpro
DB: HMMSmart
0.0 0.0 0 2.60e+01 twi:Thewi_1352