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gwf2_scaffold_2398_11 Annotations

Value Algorithm Source Identity Coverage Bit score Evalue Cross references
RluA family pseudouridine synthase; K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] Tax=RIFOXYA2_FULL_Peregrinibacteria_33_21_curated UNIPROT
DB: UniProtKB 		100.0 305.0 613 1.80e-172 ggdbv1_89392775
Ribosomal large subunit pseudouridine synthase D n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CRJ4_9CLOT similarity UNIREF
DB: UNIREF90 		44.0 0.0 253 6.00e+00 clb:Clo1100_1673
RluA family pseudouridine synthase similarity KEGG
DB: KEGG 		44.6 296.0 257 5.00e-66 clb:Clo1100_1673
PSI_RLU (db=PatternScan db_id=PS01129 from=123 to=137 evalue=0.0 interpro_id=IPR006224 interpro_description=Pseudouridine synthase, RluC/RluD, conserved site GO=Biological Process: pseudouridine synthesis (GO:0001522), Molecular Function: RNA binding (GO:0003723), Biological Process: RNA modification (GO:0009451), Molecular Function: pseudouridine synthase activity (GO:0009982)) iprscan interpro
DB: PatternScan 		0.0 0.0 0 0.0 clb:Clo1100_1673
seg (db=Seg db_id=seg from=53 to=64) iprscan interpro
DB: Seg 		0.0 0.0 0 0.0 clb:Clo1100_1673
rluA_subfam: pseudouridine synthase, RluA (db=HMMTigr db_id=TIGR00005 from=1 to=304 evalue=1.8e-85 interpro_id=IPR006225 interpro_description=Pseudouridine synthase, RluC/RluD GO=Biological Process: pseudouridine synthesis (GO:0001522), Molecular Function: RNA binding (GO:0003723), Biological Process: RNA modification (GO:0009451), Molecular Function: pseudouridine synthase activity (GO:0009982)) iprscan interpro
DB: HMMTigr 		0.0 0.0 0 1.00e+00 clb:Clo1100_1673
Alpha-L RNA-binding motif (db=superfamily db_id=SSF55174 from=1 to=60 evalue=1.7e-11) iprscan interpro
DB: superfamily 		0.0 0.0 0 1.00e+00 clb:Clo1100_1673
(db=HMMPfam db_id=PF00849 from=75 to=235 evalue=1.4e-35 interpro_id=IPR006145 interpro_description=Pseudouridine synthase, RsuA and RluB/C/D/E/F GO=Biological Process: pseudouridine synthesis (GO:0001522), Molecular Function: RNA binding (GO:0003723), Biological Process: RNA modification (GO:0009451), Molecular Function: pseudouridine synthase activity (GO:0009982)) iprscan interpro
DB: HMMPfam 		0.0 0.0 0 1.00e+00 clb:Clo1100_1673
(db=HMMPfam db_id=PF01479 from=1 to=48 evalue=1.7e-08 interpro_id=IPR002942 interpro_description=RNA-binding S4 GO=Molecular Function: RNA binding (GO:0003723)) iprscan interpro
DB: HMMPfam 		0.0 0.0 0 1.00e+00 clb:Clo1100_1673
no description (db=HMMSmart db_id=SM00363 from=1 to=66 evalue=3.0e-14 interpro_id=IPR002942 interpro_description=RNA-binding S4 GO=Molecular Function: RNA binding (GO:0003723)) iprscan interpro
DB: HMMSmart 		0.0 0.0 0 3.00e+00 clb:Clo1100_1673
RIBOSOMAL PSEUDOURIDINE SYNTHASE (db=HMMPanther db_id=PTHR10436 from=1 to=305 evalue=5.0e-65) iprscan interpro
DB: HMMPanther 		0.0 0.0 0 5.00e+00 clb:Clo1100_1673
Pseudouridine synthase (db=superfamily db_id=SSF55120 from=58 to=302 evalue=5.7e-63 interpro_id=IPR020103 interpro_description=Pseudouridine synthase, catalytic domain GO=Biological Process: pseudouridine synthesis (GO:0001522), Molecular Function: RNA binding (GO:0003723), Biological Process: RNA modification (GO:0009451), Molecular Function: pseudouridine synthase activity (GO:0009982)) iprscan interpro
DB: superfamily 		0.0 0.0 0 5.00e+00 clb:Clo1100_1673
S4 (db=ProfileScan db_id=PS50889 from=1 to=74 evalue=13.882 interpro_id=IPR002942 interpro_description=RNA-binding S4 GO=Molecular Function: RNA binding (GO:0003723)) iprscan interpro
DB: ProfileScan 		0.0 0.0 0 1.30e+01 clb:Clo1100_1673
similarity in-house
DB: RefSeq 		null null null null clb:Clo1100_1673