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gwf2_scaffold_33_94 Annotations

Value Algorithm Source Identity Coverage Bit score Evalue Cross references
SsrA-binding protein n=1 Tax=Lactobacillus coryniformis subsp. coryniformis CECT 5711 RepID=J3EPX1_9LACO similarity UNIREF
DB: UNIREF90
49.0 0.0 143 5.00e+00 ddf:DEFDS_1882
SsrA RNA (TmRNA)-binding protein, SsrA-binding protein {ECO:0000313|EMBL:KKR09256.1}; TaxID=1619067 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWF2_39_17.;" UNIPROT
DB: UniProtKB
100.0 146.0 295 3.90e-77 A0A0G0N8W1_9BACT
smpB; ssrA RNA (tmRNA)-binding protein similarity KEGG
DB: KEGG
50.0 142.0 140 3.20e-31 ddf:DEFDS_1882
SSRP (db=PatternScan db_id=PS01317 from=21 to=33 evalue=0.0 interpro_id=IPR020081 interpro_description=SsrA-binding protein, conserved site) iprscan interpro
DB: PatternScan
0.0 0.0 0 0.0 ddf:DEFDS_1882
seg (db=Seg db_id=seg from=77 to=90) iprscan interpro
DB: Seg
0.0 0.0 0 0.0 ddf:DEFDS_1882
smpB: SsrA-binding protein (db=HMMTigr db_id=TIGR00086 from=2 to=144 evalue=1.1e-54 interpro_id=IPR000037 interpro_description=SsrA-binding protein GO=Molecular Function: RNA binding (GO:0003723)) iprscan interpro
DB: HMMTigr
0.0 0.0 0 1.00e+00 ddf:DEFDS_1882
(db=HMMPfam db_id=PF01668 from=5 to=66 evalue=1.5e-22 interpro_id=IPR000037 interpro_description=SsrA-binding protein GO=Molecular Function: RNA binding (GO:0003723)) iprscan interpro
DB: HMMPfam
0.0 0.0 0 1.00e+00 ddf:DEFDS_1882
no description (db=Gene3D db_id=G3DSA:2.40.280.10 from=3 to=123 evalue=3.5e-34 interpro_id=IPR023620 interpro_description=Small protein B) iprscan interpro
DB: Gene3D
0.0 0.0 0 3.00e+00 ddf:DEFDS_1882
Small protein B (SmpB) (db=superfamily db_id=SSF74982 from=3 to=126 evalue=3.2e-39 interpro_id=IPR023620 interpro_description=Small protein B) iprscan interpro
DB: superfamily
0.0 0.0 0 3.00e+00 ddf:DEFDS_1882
SmpB (db=HAMAP db_id=MF_00023 from=1 to=146 evalue=52.283 interpro_id=IPR000037 interpro_description=SsrA-binding protein GO=Molecular Function: RNA binding (GO:0003723)) iprscan interpro
DB: HAMAP
0.0 0.0 0 5.20e+01 ddf:DEFDS_1882