Value | Algorithm | Source | Identity | Coverage | Bit score | Evalue | Cross references |
---|---|---|---|---|---|---|---|
SsrA-binding protein n=1 Tax=Lactobacillus coryniformis subsp. coryniformis CECT 5711 RepID=J3EPX1_9LACO | similarity |
UNIREF
DB: UNIREF90 |
49.0 | 0.0 | 143 | 5.00e+00 | ddf:DEFDS_1882 |
SsrA RNA (TmRNA)-binding protein, SsrA-binding protein {ECO:0000313|EMBL:KKR09256.1}; TaxID=1619067 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWF2_39_17.;" |
UNIPROT
DB: UniProtKB |
100.0 | 146.0 | 295 | 3.90e-77 | A0A0G0N8W1_9BACT | |
smpB; ssrA RNA (tmRNA)-binding protein | similarity |
KEGG
DB: KEGG |
50.0 | 142.0 | 140 | 3.20e-31 | ddf:DEFDS_1882 |
SSRP (db=PatternScan db_id=PS01317 from=21 to=33 evalue=0.0 interpro_id=IPR020081 interpro_description=SsrA-binding protein, conserved site) | iprscan |
interpro
DB: PatternScan |
0.0 | 0.0 | 0 | 0.0 | ddf:DEFDS_1882 |
seg (db=Seg db_id=seg from=77 to=90) | iprscan |
interpro
DB: Seg |
0.0 | 0.0 | 0 | 0.0 | ddf:DEFDS_1882 |
smpB: SsrA-binding protein (db=HMMTigr db_id=TIGR00086 from=2 to=144 evalue=1.1e-54 interpro_id=IPR000037 interpro_description=SsrA-binding protein GO=Molecular Function: RNA binding (GO:0003723)) | iprscan |
interpro
DB: HMMTigr |
0.0 | 0.0 | 0 | 1.00e+00 | ddf:DEFDS_1882 |
(db=HMMPfam db_id=PF01668 from=5 to=66 evalue=1.5e-22 interpro_id=IPR000037 interpro_description=SsrA-binding protein GO=Molecular Function: RNA binding (GO:0003723)) | iprscan |
interpro
DB: HMMPfam |
0.0 | 0.0 | 0 | 1.00e+00 | ddf:DEFDS_1882 |
no description (db=Gene3D db_id=G3DSA:2.40.280.10 from=3 to=123 evalue=3.5e-34 interpro_id=IPR023620 interpro_description=Small protein B) | iprscan |
interpro
DB: Gene3D |
0.0 | 0.0 | 0 | 3.00e+00 | ddf:DEFDS_1882 |
Small protein B (SmpB) (db=superfamily db_id=SSF74982 from=3 to=126 evalue=3.2e-39 interpro_id=IPR023620 interpro_description=Small protein B) | iprscan |
interpro
DB: superfamily |
0.0 | 0.0 | 0 | 3.00e+00 | ddf:DEFDS_1882 |
SmpB (db=HAMAP db_id=MF_00023 from=1 to=146 evalue=52.283 interpro_id=IPR000037 interpro_description=SsrA-binding protein GO=Molecular Function: RNA binding (GO:0003723)) | iprscan |
interpro
DB: HAMAP |
0.0 | 0.0 | 0 | 5.20e+01 | ddf:DEFDS_1882 |