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ACDOP11_33

Alias: ACDOP11_37791.21023.10

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Displaying items 31-35 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACDOP11_33_31
Microgenomates bacterium GW2011_GWC1_38_14, Microgenomates, Bacteria

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comp(18055..18339)
DNA (285bp) protein (95aa)
30S ribosomal protein S19
seg (db=Seg db_id=seg from=13 to=24)
RIBOSOMAL_S19 (db=PatternScan db_id=PS00323 from=53 to=77 evalue=0.0 interpro_id=IPR020934 interpro_description=Ribosomal protein S19 conserved site GO=Molecular Function: RNA binding (GO:0003723))
rpsS_bact: ribosomal protein S19 (db=HMMTigr db_id=TIGR01050 from=1 to=93 evalue=2.3e-53 interpro_id=IPR005732 interpro_description=Ribosomal protein S19, bacterial-type GO=Molecular Function: structural constituent of ribosome (GO:0003735), Biological Process: translation (GO:0006412), Cellular Component: small ribosomal subunit (GO:0015935))
ACDOP11_33_32
GWA1_OP11_39_32_plus, Levybacteria, Microgenomates, Bacteria

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comp(18339..19085)
DNA (747bp) protein (249aa)
rplB; 50S ribosomal protein L2
seg (db=Seg db_id=seg from=2 to=11)
seg (db=Seg db_id=seg from=126 to=137)
rplB_bact: ribosomal protein L2 (db=HMMTigr db_id=TIGR01171 from=1 to=246 evalue=4.0e-105 interpro_id=IPR005880 interpro_description=Ribosomal protein L2, bacterial-type GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: structural constituent of ribosome (GO:0003735), Biological Process: translation (GO:0006412), Cellular Component: large ribosomal subunit (GO:0015934), Molecular Function: transferase activity (GO:0016740))
ACDOP11_33_33
GWA2_OP11_var_36_13, Levybacteria, Microgenomates, Bacteria

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comp(19088..19384)
DNA (297bp) protein (99aa)
seg (db=Seg db_id=seg from=57 to=72)
seg (db=Seg db_id=seg from=31 to=45)
RIBOSOMAL_L23 (db=PatternScan db_id=PS00050 from=78 to=93 evalue=0.0 interpro_id=IPR001014 interpro_description=Ribosomal protein L23/L25, conserved site GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
Ribosomal proteins S24e, L23 and L15e (db=superfamily db_id=SSF54189 from=1 to=94 evalue=1.9e-23 interpro_id=IPR012678 interpro_description=Ribosomal protein L23/L15e, core GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
ACDOP11_33_34
GWA1_OP11_39_32_plus, Levybacteria, Microgenomates, Bacteria

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comp(19384..20097)
DNA (714bp) protein (238aa)
rplD; 50S ribosomal protein L4
seg (db=Seg db_id=seg from=164 to=181)
Ribosomal protein L4 (db=superfamily db_id=SSF52166 from=24 to=232 evalue=3.2e-61 interpro_id=IPR002136 interpro_description=Ribosomal protein L4/L1e GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
50S RIBOSOMAL PROTEIN L4 (db=HMMPanther db_id=PTHR10746 from=41 to=233 evalue=3.1e-60 interpro_id=IPR013005 interpro_description=Ribosomal protein L4/L1e, bacterial-type)
ACDOP11_33_35
R_OP11_Levybacteria_37_11, Levybacteria, Microgenomates, Bacteria

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comp(20087..20857)
DNA (771bp) protein (257aa)
rplC; 50S ribosomal protein L3
seg (db=Seg db_id=seg from=180 to=202)
seg (db=Seg db_id=seg from=149 to=164)
50S RIBOSOMAL PROTEIN L3 (db=HMMPanther db_id=PTHR11229 from=2 to=197 evalue=4.6e-53)
Displaying items 31-35 of 35 in total

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