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ACDOP11_4_11

Organism: ACDOP11

partial RP 43 / 55 MC: 34 BSCG 39 / 51 MC: 27 ASCG 0 / 38
Location: comp(5416..5730)

Top 3 Functional Annotations

Value Algorithm Source
RNA-binding protein (Contains KH domain)-like protein (Fragment) n=1 Tax=candidate division TM7 genomosp. GTL1 RepID=A5KSZ2_9BACT (db=UNIREF evalue=7.0e-11 bit_score=69.7 identity=48.57 coverage=65.7142857142857) similarity UNIREF
DB: UNIREF
  • Identity: 48.57
  • Coverage: 65.71
  • Bit_score: 69
  • Evalue 7.00e-11
KH_1 (db=HMMPfam db_id=PF00013 from=37 to=64 evalue=4.9e-05 interpro_id=IPR018111 interpro_description=K Homology, type 1, subgroup GO=Molecular Function: RNA binding (GO:0003723)) iprscan interpro
DB: HMMPfam
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 4.90e-05
KH_TYPE_1 (db=ProfileScan db_id=PS50084 from=33 to=104 evalue=8.806 interpro_id=IPR004088 interpro_description=K Homology, type 1 GO=Molecular Function: RNA binding (GO:0003723)) iprscan interpro
DB: ProfileScan
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 8.81e+00

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Taxonomy

uncultured bacterium → Bacteria

Sequences

DNA sequence
Length: 315
TCATTGTTCTGCTGGACTAGTGCTTTGATCTTTAGTACTTGGTTTAACATGGTATTTTTTGCTCCTTCGCTCCGGAACATCTAACTTGATGTTTATTCTGGCGTTCTGTTTCATACCGACAATTTTCATAATTTTTCGGATTGACTGAATGGTTGAACCATCTTTGCCAATTACAGCTCCTGCGTCTTTCTCATCAAGCGTGACAGTGAGAAGGACTCCCATCTCATCGATGTTTCGCCCGATTTTTACTGCTTCCGGTTTGTCGACTATGGCTTTTAATATTGTTTCTAGTATTTCTGAGTCTCTGTTTTGCAT
PROTEIN sequence
Length: 105
SLFCWTSALIFSTWFNMVFFAPSLRNI*LDVYSGVLFHTDNFHNFSD*LNG*TIFANYSSCVFLIKRDSEKDSHLIDVSPDFYCFRFVDYGF*YCF*YF*VSVLH