| Value | Algorithm | Source | Identity | Coverage | Bit score | Evalue | Cross references |
|---|---|---|---|---|---|---|---|
| rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6) | similarity |
KEGG
DB: KEGG |
45.8 | 999.99 | 970 | 5.50e-280 | tro:trd_0991 |
| DNA-directed RNA polymerase subunit beta n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9KZZ4_THERP rbh | similarity |
UNIREF
DB: UNIREF90 |
45.0 | 0.0 | 969 | 7.00e+00 | tro:trd_0991 |
| no description (db=Gene3D db_id=G3DSA:3.90.1100.10 from=18 to=642 evalue=2.4e-88) | iprscan |
interpro
DB: Gene3D |
0.0 | 0.0 | 0 | 2.00e+00 | tro:trd_0991 |
| no description (db=Gene3D db_id=G3DSA:2.40.270.10 from=713 to=1016 evalue=2.0e-52 interpro_id=IPR007120 interpro_description=DNA-directed RNA polymerase, subunit 2, domain 6 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription, DNA-dependent (GO:0006351)) | iprscan |
interpro
DB: Gene3D |
0.0 | 0.0 | 0 | 2.00e+00 | tro:trd_0991 |
| (db=HMMPfam db_id=PF00562 from=644 to=1030 evalue=3.9e-120 interpro_id=IPR007120 interpro_description=DNA-directed RNA polymerase, subunit 2, domain 6 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription, DNA-dependent (GO:0006351)) | iprscan |
interpro
DB: HMMPfam |
0.0 | 0.0 | 0 | 3.00e+00 | tro:trd_0991 |
| (db=HMMPfam db_id=PF04560 from=1032 to=1107 evalue=5.3e-28 interpro_id=IPR007641 interpro_description=RNA polymerase Rpb2, domain 7 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription, DNA-dependent (GO:0006351)) | iprscan |
interpro
DB: HMMPfam |
0.0 | 0.0 | 0 | 5.00e+00 | tro:trd_0991 |
| (db=HMMPfam db_id=PF04561 from=161 to=333 evalue=2.2e-22 interpro_id=IPR007642 interpro_description=RNA polymerase Rpb2, domain 2 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription, DNA-dependent (GO:0006351)) | iprscan |
interpro
DB: HMMPfam |
0.0 | 0.0 | 0 | 2.00e+00 | tro:trd_0991 |
| (db=HMMPfam db_id=PF04563 from=27 to=388 evalue=3.1e-18 interpro_id=IPR007644 interpro_description=RNA polymerase, beta subunit, protrusion GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription, DNA-dependent (GO:0006351)) | iprscan |
interpro
DB: HMMPfam |
0.0 | 0.0 | 0 | 3.00e+00 | tro:trd_0991 |
| (db=HMMPfam db_id=PF04565 from=394 to=462 evalue=8.2e-17 interpro_id=IPR007645 interpro_description=RNA polymerase Rpb2, domain 3 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription, DNA-dependent (GO:0006351)) | iprscan |
interpro
DB: HMMPfam |
0.0 | 0.0 | 0 | 8.00e+00 | tro:trd_0991 |
| (db=HMMPfam db_id=PF10385 from=518 to=583 evalue=3.2e-10 interpro_id=IPR019462 interpro_description=DNA-directed RNA polymerase, beta subunit, external 1 domain GO=Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription, DNA-dependent (GO:0006351)) | iprscan |
interpro
DB: HMMPfam |
0.0 | 0.0 | 0 | 3.00e+00 | tro:trd_0991 |
| DNA-DIRECTED RNA POLYMERASE BETA CHAIN (db=HMMPanther db_id=PTHR20856:SF3 from=369 to=1116 evalue=6.2e-297 interpro_id=IPR010243 interpro_description=DNA-directed RNA polymerase, beta subunit, bacterial-type GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription, DNA-dependent (GO:0006351)) | iprscan |
interpro
DB: HMMPanther |
0.0 | 0.0 | 0 | 6.00e+00 | tro:trd_0991 |
| DNA-DIRECTED RNA POLYMERASE I SUBUNIT 2 (db=HMMPanther db_id=PTHR20856 from=369 to=1116 evalue=6.2e-297 interpro_id=IPR015712 interpro_description=DNA-directed RNA polymerase, subunit 2 GO=Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription, DNA-dependent (GO:0006351), Molecular Function: ribonucleoside binding (GO:0032549)) | iprscan |
interpro
DB: HMMPanther |
0.0 | 0.0 | 0 | 6.00e+00 | tro:trd_0991 |
| RNApol_bact_RpoB (db=HAMAP db_id=MF_01321 from=12 to=1108 evalue=10.622 interpro_id=IPR010243 interpro_description=DNA-directed RNA polymerase, beta subunit, bacterial-type GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription, DNA-dependent (GO:0006351)) | iprscan |
interpro
DB: HAMAP |
0.0 | 0.0 | 0 | 1.00e+01 | tro:trd_0991 |
| beta and beta-prime subunits of DNA dependent RNA-polymerase (db=superfamily db_id=SSF64484 from=11 to=1111 evalue=7.6e-302) | iprscan |
interpro
DB: superfamily |
0.0 | 0.0 | 0 | 7.00e+00 | tro:trd_0991 |
| DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta {ECO:0000313|EMBL:KKP44032.1}; EC=2.7.7.6 {ECO:0000313|EMBL:KKP44032.1};; TaxID=1619089 species="Bacteria; candidate |
UNIPROT
DB: UniProtKB |
100.0 | 999.99 | 2192 | 0.0 | A0A0G0CKU8_9BACT |
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