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NECEvent2014_4_7_scaffold_157_12

Organism: NECEvent2014_4_7_Clostridium_7_2_43FAA-rel_28_17_lowerCov

near complete RP 48 / 55 MC: 6 BSCG 46 / 51 MC: 5 ASCG 15 / 38 MC: 2
Location: comp(9399..10112)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-E factor n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H368_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 91.1
  • Coverage: 235.0
  • Bit_score: 418
  • Evalue 6.10e-114
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.1
  • Coverage: 235.0
  • Bit_score: 418
  • Evalue 8.50e-114
sigE; RNA polymerase sigma-E factor similarity KEGG
DB: KEGG
  • Identity: 85.5
  • Coverage: 235.0
  • Bit_score: 398
  • Evalue 1.80e-108

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Taxonomy

Clostridium sp. 7_2_43FAA → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 714
ATGGTTATGATAAAAATAAAAATATTGTTAAATAGAATTTTAGAAAAATTAAAGTTTTTAAAAGGTGAACTCCATTATGTTGGAGGAAGCGAAGCCTTACCTCCTCCATTAAAAAAGGATGAAGAAGAAGAATTAGTAAATAAATTAATTCAAGGTGATGAATCCATAAGAGATATTCTTATTGAGAGAAACTTAAGATTAGTAGTATATATAGCTAGGAAATTTGAAAATACTGGCTTTGGAGTAGAAGATTTAATCTCAGTTGGTACTATTGGATTAATAAAAGCTGTAAATACTTTTAATCCAGAAAAAAAAATAAAACTTGCAACGTATGCATCTAGATGTATAGAAAATGAAATACTAATGTATTTAAGAAGAAACAGTAAGGTAAAAGCTGAAATATCATTTTATGAGCCTTTAAATATTGATTGGGATGGTAATGAACTTTTGTTATCAGATATTTTAGGAACTGAAAATGATATAGTTTATAATTTAATAGAAGATGAAGTAGATAAAGAATTACTATTTTTAGCCCTCAAGCATTTAAATGACAGAGAAAAAGAAATTGTAAGATTGAGATTTGGATTAAATGGTACTAGAGAAAAGACTCAAAAGGAAGTGGCTGATATGCTTGGTATCTCCCAATCTTATATTTCTAGACTAGAAAAGAAAATTATTAATAGATTGAAAAAAGAAATCAATAAGATGATTTAG
PROTEIN sequence
Length: 238
MVMIKIKILLNRILEKLKFLKGELHYVGGSEALPPPLKKDEEEELVNKLIQGDESIRDILIERNLRLVVYIARKFENTGFGVEDLISVGTIGLIKAVNTFNPEKKIKLATYASRCIENEILMYLRRNSKVKAEISFYEPLNIDWDGNELLLSDILGTENDIVYNLIEDEVDKELLFLALKHLNDREKEIVRLRFGLNGTREKTQKEVADMLGISQSYISRLEKKIINRLKKEINKMI*