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NECEvent2014_4_7_scaffold_386_11

Organism: NECEvent2014_4_7_Clostridium_7_2_43FAA-rel_28_17_lowerCov

near complete RP 48 / 55 MC: 6 BSCG 46 / 51 MC: 5 ASCG 15 / 38 MC: 2
Location: comp(9211..9618)

Top 3 Functional Annotations

Value Algorithm Source
Single-strand binding protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HH64_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 76.5
  • Coverage: 153.0
  • Bit_score: 225
  • Evalue 2.50e-56
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|PIRNR:PIRNR002070}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=457396 species="Bacteria; Firmicutes; Clostrid similarity UNIPROT
DB: UniProtKB
  • Identity: 76.5
  • Coverage: 153.0
  • Bit_score: 225
  • Evalue 3.50e-56
ssb; single-stranded DNA-binding family protein similarity KEGG
DB: KEGG
  • Identity: 64.6
  • Coverage: 144.0
  • Bit_score: 198
  • Evalue 9.30e-49

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Taxonomy

Clostridium sp. 7_2_43FAA → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 408
ATGAATAAGGTAATTTTAATCGGTAGAATTACAAAGGATCCAGAGTTAAATTATGCAGCAGGAACAGGAACTGCAATTTGTAGATTTACTCTAGCAGTAACAAGACCTTTCAAAAAGGATGAAACAGATTTTATTAACTGTATAGCCTTTGGTAAGACTGGAGAAACAATAGCACAATATCTAACAAAGGGAAGGCAATTAGCAGTAACAGGAAGTATAAGAACAGGTAGTTATGATGCTAAGGATGGAACTAAGAGATATACAACAGATATAGTAGTGGATTCATTTGAATTTATAGGAAGTGGACAAGCTAATAATAATCAAGATGGAAAATCTAACAGTTTTAACCGAGATAGTAATTTTGAAGAAGATATGACTCCTGTAGAAGATGGAGATATGCCTTTTTAG
PROTEIN sequence
Length: 136
MNKVILIGRITKDPELNYAAGTGTAICRFTLAVTRPFKKDETDFINCIAFGKTGETIAQYLTKGRQLAVTGSIRTGSYDAKDGTKRYTTDIVVDSFEFIGSGQANNNQDGKSNSFNRDSNFEEDMTPVEDGDMPF*