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NECEvent2014_5_8_scaffold_223_14

Organism: NECEvent2014_5_8_Clostridium_sporogenes-rel_28_12

near complete RP 51 / 55 MC: 4 BSCG 51 / 51 MC: 3 ASCG 15 / 38 MC: 1
Location: 6194..6736

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L5 n=17 Tax=Clostridium RepID=RL5_CLOB1 similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 180.0
  • Bit_score: 352
  • Evalue 1.80e-94
  • rbh
rplE; 50S ribosomal protein L5 similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 180.0
  • Bit_score: 352
  • Evalue 5.10e-95
50S ribosomal protein L5 {ECO:0000255|HAMAP-Rule:MF_01333}; TaxID=515621 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 180.0
  • Bit_score: 352
  • Evalue 2.60e-94

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Taxonomy

Clostridium botulinum → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 543
ATGATGCCAAGATTACAAGAAAAGTATGAAAAAGAAGTAGTATCAGCTTTAATGGATAAGTTCGGATATAAAAATATAATGGAAGTGCCAAAACTTGAAAAAATAGTTATCAATATGGGTGTTGGTGAAGCTAAAGAGAATCAAAAATCTCTTGAAGCGGCAGTAGAAGATTTAGCTAAAATAACTGGTCAAAAACCAATATTAACTAAAGCTAAAAAATCAGTAGCTAACTTTAAAATAAGAGAAGATATGCCACTAGGTTGTAAAGTTACATTAAGAAAACAAAACATGTATGAATTTGCAGATAAATTAATAAATGTGGCTTTACCTAGAGTTAGAGATTTCAGCGGAGTTTCAAGTAAATCATTTGATGGAAGAGGAAACTATGCTATAGGAATAAAAGAACAATTAATATTCCCAGAAATAGAATTTGATAAGATTGATAAAATTAGAGGTATGGATATAATTTTTGTAACAACTGCAAAGACTGACGAGGAAGCAAGAGAACTATTAAGATTCCTTGGAATGCCATTTGCTCGTTAA
PROTEIN sequence
Length: 181
MMPRLQEKYEKEVVSALMDKFGYKNIMEVPKLEKIVINMGVGEAKENQKSLEAAVEDLAKITGQKPILTKAKKSVANFKIREDMPLGCKVTLRKQNMYEFADKLINVALPRVRDFSGVSSKSFDGRGNYAIGIKEQLIFPEIEFDKIDKIRGMDIIFVTTAKTDEEARELLRFLGMPFAR*