ggKbase home page

NECEvent2014_5_8_scaffold_137_20

Organism: NECEvent2014_5_8_Clostridium_perfringens_28_7

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 15 / 38 MC: 1
Location: 17744..18562

Top 3 Functional Annotations

Value Algorithm Source
rnhB; ribonuclease HII (EC:3.1.26.4) similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 272.0
  • Bit_score: 543
  • Evalue 3.10e-152
Ribonuclease HII {ECO:0000255|HAMAP-Rule:MF_00052}; Short=RNase HII {ECO:0000255|HAMAP-Rule:MF_00052};; EC=3.1.26.4 {ECO:0000255|HAMAP-Rule:MF_00052};; TaxID=195103 species="Bacteria; Firmicutes; Clos similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 272.0
  • Bit_score: 543
  • Evalue 1.50e-151
Ribonuclease HII n=2 Tax=Clostridium perfringens RepID=RNH2_CLOP1 similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 272.0
  • Bit_score: 543
  • Evalue 1.10e-151
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Clostridium perfringens → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 819
ATGGATAATTTAATAAAAGATATGAGAGAAAATTTAAATTCATACTCTTTTAAAGTAGTAAGTGATTTAGTAAAAGAGTTAGATGTAAATAGAGATAACAAAGCTCAAATAAAAGAACTTGCTGACTTATTAAAAGAGGATAAAAGAAAAAATGTATCATCTTTAGGAAATAGATTAGAGAAGAACCTAAATAATCTTATTAAAGAAGAGGAAAGAGTTAAAAATATGTATCTTTTTGATAAGAGTTTTGGTGATTATAAATATGTAGCTGGAGTTGATGAGGTTGGAAGAGGTCCTTTAGCAGGTCCTATAGTTTCAGCAGCGGTAATATTAGATTCTAGTGATTTAGATGATATAATTCTTTACATAAATGACTCAAAAAAATTATCAGAACATAAAAGAGAAGAGTTAAGTGAGATCATAAAAGAAAAAGCCTTAAGTTACTCCATTTCAATGTGTGATAGCAAGGAAATAGATGAAAAAGGTATAGGATACTGTAATAATCATGTATTCATAAAAGCTTGTGAAGGACTAAGTATAAAGCCAGATTTAGTCCTTTCTGATGGATATTTAATAAAGAACTTTAATGGAGAAAATAAGCATGTTATAAAAGGTGATACAAAAAGTGCTTGTATAGCCTGTGCTTCAATAATTGCAAAAGTTTATAGAGATAATATTATGAAGGAATATCATAAAAAATATCCGCAATATGATTTTGAAAAAAATGTTGGTTATGGAACTAAGACTCATGTAGATGCTTTAAAAGAAGTAGGGCCTACAGAAATTCATAGAATGAGTTTTTTAAAGAATATTTTATAG
PROTEIN sequence
Length: 273
MDNLIKDMRENLNSYSFKVVSDLVKELDVNRDNKAQIKELADLLKEDKRKNVSSLGNRLEKNLNNLIKEEERVKNMYLFDKSFGDYKYVAGVDEVGRGPLAGPIVSAAVILDSSDLDDIILYINDSKKLSEHKREELSEIIKEKALSYSISMCDSKEIDEKGIGYCNNHVFIKACEGLSIKPDLVLSDGYLIKNFNGENKHVIKGDTKSACIACASIIAKVYRDNIMKEYHKKYPQYDFEKNVGYGTKTHVDALKEVGPTEIHRMSFLKNIL*