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NECEvent2014_5_8_scaffold_172_38

Organism: NECEvent2014_5_8_Clostridium_perfringens_28_7

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 15 / 38 MC: 1
Location: 37421..38542

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor SigA n=10 Tax=Clostridium perfringens RepID=H7CY33_CLOPF similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 373.0
  • Bit_score: 712
  • Evalue 2.40e-202
  • rbh
sigA; RNA polymerase sigma factor RpoD similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 373.0
  • Bit_score: 712
  • Evalue 6.90e-203
RNA polymerase sigma factor SigA {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringen similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 373.0
  • Bit_score: 712
  • Evalue 3.40e-202

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Taxonomy

Clostridium perfringens → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1122
ATGGCGGAAGGAGGTAATAAAATGAAAGCTAAAACAACAAAAGCAAAAAAAGGTGAAGGTAAAGAAAAAGTTGACAAAATGGTCTTAGTAAAAAGACTTATAGATAAAGGTAAAAAAAGCGGTTCATTGACTTACAAGGAGATAATGGATGAGCTTGATGAAATAGAATTAAACCCAGAACAAATAGAAAAAATCTATGAGGTTCTAGAATCAATGGGTATAGAGGTCATAAGTGAAATAGAGCAAGAAGAGGAAGAGGAGGAAGAATTAGATCTTTCTGTTCCAGAAGGTATTGCTATTGATGACCCTGTAAGAATGTACTTAAAAGAAATAGGTAAAGTGCCACTATTATCATCAGAGGATGAAATAGAGCTTGCTAAAAAAATAGAAGAAGGAAGCAACTATGCTAAGAAAAAATTAGCAGAGGCTAACTTAAGACTTGTTGTAAGTATAGCTAAAAGATATGTTGGTAGAGGAATGTTATTCCTAGATCTTATACAAGAAGGTAACTTAGGTCTTATAAAGGCTGTTGAAAAATTTGATTACAGAAAAGGGTATAAGTTCTCAACATATGCTACATGGTGGATAAGACAGGCAATAACTAGAGCTATTGCTGACCAAGCAAGAACTATAAGAATACCAGTTCATATGGTAGAAACTATAAATAAACTTATAAGAATACAAAGACAATTAGTTCAAGAGTTAGGAAGAGATCCATTACCAGAGGAATTATCAAAACAAATGGATATGCCAGTAGATAAGGTAAGAGAAATCTTAAAAATAGCTCAAGAACCAGTTTCATTAGAAACTCCAATTGGTGAAGAGGAAGATTCACATTTAGGTGACTTTATACCAGATGATGATGCTCCAGCACCAGCAGAGGCAGCAGCCTTTACAATGTTAAAAGAACAATTAATAAATGTTTTAGATACTTTAACTCCTAGAGAGGAAAAAGTATTAAGATTAAGATTTGGATTAGATGATGGAAGAGCTAGAACTCTTGAAGAAGTTGGTAAAGAATTCAACGTAACTAGAGAGAGAATTAGACAGATTGAAGCAAAAGCTTTAAGAAAATTAAGACATCCAAGTAGAAGTAAAAAGTTAAAAGATTATTTAGATTAG
PROTEIN sequence
Length: 374
MAEGGNKMKAKTTKAKKGEGKEKVDKMVLVKRLIDKGKKSGSLTYKEIMDELDEIELNPEQIEKIYEVLESMGIEVISEIEQEEEEEEELDLSVPEGIAIDDPVRMYLKEIGKVPLLSSEDEIELAKKIEEGSNYAKKKLAEANLRLVVSIAKRYVGRGMLFLDLIQEGNLGLIKAVEKFDYRKGYKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLIRIQRQLVQELGRDPLPEELSKQMDMPVDKVREILKIAQEPVSLETPIGEEEDSHLGDFIPDDDAPAPAEAAAFTMLKEQLINVLDTLTPREEKVLRLRFGLDDGRARTLEEVGKEFNVTRERIRQIEAKALRKLRHPSRSKKLKDYLD*