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NECEvent2014_5_8_scaffold_396_8

Organism: NECEvent2014_5_8_Clostridium_perfringens_28_7

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 15 / 38 MC: 1
Location: 8116..10278

Top 3 Functional Annotations

Value Algorithm Source
RNA-binding protein n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TNE3_CLOP1 similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 720.0
  • Bit_score: 1396
  • Evalue 0.0
  • rbh
RNA-binding protein {ECO:0000313|EMBL:EDT23977.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 362 similarity UNIPROT
DB: UniProtKB
  • Identity: 99.9
  • Coverage: 720.0
  • Bit_score: 1396
  • Evalue 0.0
RNA-binding protein similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 720.0
  • Bit_score: 1396
  • Evalue 0.0

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Taxonomy

Clostridium perfringens → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 2163
ATGGACAATATAAATCATATTTTATCAAAGGAACTTGGTATTTCATTAAAACAGGTAACAAGCGTTATAGAAATGTTAGATGAAGGAAATACAGTACCTTTCATAGCTAGATATAGAAAAGAAAGAACTGGTGGATTAACAGATGAGGTTCTAAGAAAATTTAATGAGAGATTAACATATTTAAGAAATTTAGAAAGTAGAAAAGAAGATGTTTTAAGAATAATAGAGGAGCAAGAAAAATTAACTCCAGAATTAAAACTAAAAATTGAGAAAGCTACTACCCTTACTGAGGTTGAAGATATATATAGACCTTTTAAAGCTAAAAAGAGAACAAGAGCTACTATGGCTGTTGAAAAAGGATTAAAGCCATTAGCAGAGCTTATTCTATCAGGAGAGTTTAATGGTGATATAGTAGAAGAGGCTAATAAATATATTAATGAAGAAAAAGGTGTTAAAAATGAAGAGGAAGCTCTTCAAGGGGCTATGGATATTATAAGTGAAATAATATCTGATAATGCTGATTATAGAAAATGGATTAGAAATTTTGTTCAAAAGGATGGAATAATTCAGGTAAAGGGAAGCAGTGAAGAACAAACACCTTATGAAATGTATTATGATTATAAGGAGCCTGTTAGAACAATTCCATCTCATAGAATATTAGCTATAAATAGAGGAGAAAAAGAAAAAATTCTTTCAGTTAAAGTAACTTGTAATGATGATATAATTATAGATTATTTAAATAAAAAAGTTTTAAAGGGAAATAAAATTACTGATAAGTATTTAGAAGAAAGTATAAAGGACTCCTTTAAAAGACTTATATATCCTTCAATAGAAAGGGAAATAAGAAGTGAATTAACCTCTAAGGGAGAAGAGGGAGCAATTGATATATTTAAGGCTAATTTAAAAGCTCTCTTAATGCAAGCTCCTATTAAGGGAAAAGTTGTAATGGGATTTGACCCTGGATTTAGAACTGGATGTAAGGTAGCAATCTTAGATGAAACAGGAAAATTTGTTGAGAATACAACAGTTTATCCAACAGCCCCTCAAAATAGAATTGATGAAACAATAAGTACACTTAAAAAACTTATTAAAAAACATGGAGTTCAAGTTATTTCTTTAGGAAATGGAACAGCTTCAAGAGAATCAGAAGAAGTAATTGCAAAGATGCTTAAGGAAATAAAAGAGGAAACAGGAAAAGAATTATTTTATGTTATAGTTTCTGAGGCAGGTGCTTCTGTTTATTCAGCATCAGAACTTGCAAATAAGGAATATCCAGACTTAGATGTAACTGTAAGAGGAGCAATTTCTATAGGAAGAAGACTTCAAGATCCATTAGCTGAGCTTGTTAAAATAGATCCTAAGGCTATAGGAGTAGGACAATATCAACATGATGTAACTCAGAAAAAACTTGATGAATCCTTAGCAGGGATAGTTGAGGATTGTGTTAATAATGTAGGAGTAGATTTAAATATAGCAACTCCATCATTATTAAGTTATATTTCAGGGATAAATGCTTCAATAGCTAAAAATATTGTTGATTATAGAGAAGAAAATGGTAAGTTTAAAAGTAGAAAAGAGCTTTTAAAAGTTAAAAGATTAGGACAAAAAGCTTATGAACAATGTGCAGGATTCTTAAGAGTTATGGAAAGCAAAGAAGCTTTAGATAATACTTCAGTTCATCCAGAGTCATATAAAGTAGCTAAGGAACTTATAAAAACTTTAGGATATACAGAAGAAGATTTAAAAAATGGCAAATTAGTAGATATAGATGAGAGAGTAAAAGCAAAAGGAATTTCTAACTTAGCAAAAGAATTAGAAGTTGGAGAACCAACACTTAATGATATTATAAAGGAAATTAAAAAGCCTGGAAGAGATCCAAGAGAGGAATTACCTAAACCAATATTTAAGTCTGGCGTAATAGAAATGAAAGATTTAAAACCAGGTATGATTTTAATGGGGACAGTTAGAAATGTATCTGATTTTGGTGCTTTTGTAGATATTGGAGTTCACCAAGATGGATTAGTTCATAAGAGCCAAATGGCAGATAGCTTTGTTAAACATCCACTTGATATAGTTAAGGTTGGAGATGTTGTAGAAGTTAGAATATTAGATGTTGATTTAAAAAGAAAGAGAATTTCATTATCAATGAAAAAAGAAGGTTAA
PROTEIN sequence
Length: 721
MDNINHILSKELGISLKQVTSVIEMLDEGNTVPFIARYRKERTGGLTDEVLRKFNERLTYLRNLESRKEDVLRIIEEQEKLTPELKLKIEKATTLTEVEDIYRPFKAKKRTRATMAVEKGLKPLAELILSGEFNGDIVEEANKYINEEKGVKNEEEALQGAMDIISEIISDNADYRKWIRNFVQKDGIIQVKGSSEEQTPYEMYYDYKEPVRTIPSHRILAINRGEKEKILSVKVTCNDDIIIDYLNKKVLKGNKITDKYLEESIKDSFKRLIYPSIEREIRSELTSKGEEGAIDIFKANLKALLMQAPIKGKVVMGFDPGFRTGCKVAILDETGKFVENTTVYPTAPQNRIDETISTLKKLIKKHGVQVISLGNGTASRESEEVIAKMLKEIKEETGKELFYVIVSEAGASVYSASELANKEYPDLDVTVRGAISIGRRLQDPLAELVKIDPKAIGVGQYQHDVTQKKLDESLAGIVEDCVNNVGVDLNIATPSLLSYISGINASIAKNIVDYREENGKFKSRKELLKVKRLGQKAYEQCAGFLRVMESKEALDNTSVHPESYKVAKELIKTLGYTEEDLKNGKLVDIDERVKAKGISNLAKELEVGEPTLNDIIKEIKKPGRDPREELPKPIFKSGVIEMKDLKPGMILMGTVRNVSDFGAFVDIGVHQDGLVHKSQMADSFVKHPLDIVKVGDVVEVRILDVDLKRKRISLSMKKEG*