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NECEvent2014_3_4_scaffold_235

Alias: 173_002_scaffold_235

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_3_4_scaffold_235_1
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

387..1208
DNA (822bp) protein (274aa)
UPI0003D5E62C related cluster n=1 Tax=unknown RepID=UPI0003D5E62C rbh
TnsA endonuclease {ECO:0000313|EMBL:ETI91661.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
Tn7-like transposition protein A
NECEvent2014_3_4_scaffold_235_2
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1192..3255
DNA (2064bp) protein (688aa)
UPI0003D61B2C related cluster n=1 Tax=unknown RepID=UPI0003D61B2C rbh
Integrase catalytic region {ECO:0000313|EMBL:ETI91660.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
integrase catalytic subunit
NECEvent2014_3_4_scaffold_235_3
Thermoanaerobacter wiegelii, Thermoanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

3236..4621
DNA (1386bp) protein (462aa)
Tn7-like transposition protein C n=1 Tax=Thermoanaerobacter wiegelii Rt8.B1 RepID=G2MTW3_9THEO rbh
Tn7-like transposition protein C
Tn7-like transposition protein C {ECO:0000313|EMBL:AEM79498.1}; TaxID=697303 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Thermoanaerobacter.;" source="T
NECEvent2014_3_4_scaffold_235_4
Ruminiclostridium thermocellum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4618..5883
DNA (1266bp) protein (422aa)
Tn7-like transposition protein D n=1 Tax=Clostridium thermocellum (strain ATCC 27405 / DSM 1237) RepID=A3DEG7_CLOTH
Tn7-like transposition protein D
Tn7-like transposition protein D {ECO:0000313|EMBL:ABN52346.1}; TaxID=203119 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium thermoc
NECEvent2014_3_4_scaffold_235_5
unknown

Not on your lists

6287..6589
DNA (303bp) protein (101aa)

This feature has no annotations

NECEvent2014_3_4_scaffold_235_6
unknown

Not on your lists

6608..7030
DNA (423bp) protein (141aa)

This feature has no annotations

NECEvent2014_3_4_scaffold_235_7
unknown

Not on your lists

7044..7205
DNA (162bp) protein (54aa)

This feature has no annotations

NECEvent2014_3_4_scaffold_235_8
Geobacillus caldoxylosilyticus, Geobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

7260..7571
DNA (312bp) protein (104aa)
Uncharacterized protein n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MWV6_CLOSA
Uncharacterized protein {ECO:0000313|EMBL:GAJ41735.1}; TaxID=1220594 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Geobacillus.;" source="Geobacillus caldoxylosilyticus NBRC 107762.
hypothetical protein
NECEvent2014_3_4_scaffold_235_9
Geobacillus caldoxylosilyticus, Geobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

7744..10413
DNA (2670bp) protein (890aa)
UPI0003D5DF0F related cluster n=1 Tax=unknown RepID=UPI0003D5DF0F rbh
Uncharacterized protein {ECO:0000313|EMBL:GAJ41736.1}; TaxID=1220594 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Geobacillus.;" source="Geobacillus caldoxylosilyticus NBRC 107762.
hypothetical protein
NECEvent2014_3_4_scaffold_235_10
unknown

Not on your lists

comp(10455..11129)
DNA (675bp) protein (225aa)

This feature has no annotations

NECEvent2014_3_4_scaffold_235_11
unknown

Not on your lists

11295..11450
DNA (156bp) protein (52aa)

This feature has no annotations

NECEvent2014_3_4_scaffold_235_12
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12927..13853
DNA (927bp) protein (309aa)
UPI0003D63857 related cluster n=1 Tax=unknown RepID=UPI0003D63857 rbh
StbA family protein {ECO:0000313|EMBL:ETI91655.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
actin-like ATPase involved in cell division
NECEvent2014_3_4_scaffold_235_13
[Clostridium] clariflavum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13858..14133
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45) RepID=G8M0B4_CLOCD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV66921.1}; TaxID=720554 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium clariflavum (str
NECEvent2014_3_4_scaffold_235_14
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14331..16259
DNA (1929bp) protein (643aa)
N-6 DNA methylase n=1 Tax=Oceanobacillus sp. Ndiop RepID=UPI00028987EF
Uncharacterized protein {ECO:0000313|EMBL:KJZ84233.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
N-6 DNA methylase
NECEvent2014_3_4_scaffold_235_15
Desulfovibrio salexigens, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16265..18859
DNA (2595bp) protein (865aa)
N-6 DNA methylase n=1 Tax=Desulfovibrio salexigens (strain ATCC 14822 / DSM 2638 / NCIB 8403 / VKM B-1763) RepID=C6BT25_DESAD rbh
N-6 DNA methylase
N-6 DNA methylase {ECO:0000313|EMBL:ACS79729.1}; TaxID=526222 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sa
NECEvent2014_3_4_scaffold_235_16
GWF2_OD1_38_76, Parcubacteria, Bacteria

Not on your lists

18856..20151
DNA (1296bp) protein (432aa)
Type I restriction-modification system, specificity subunit S (EC:3.1.21.3)
hypothetical protein n=1 Tax=Salinicoccus albus RepID=UPI00036C54F8
Type I restriction modification DNA specificity domain protein {ECO:0000313|EMBL:KKQ82217.1}; TaxID=1618960 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF2_38_76.;"
NECEvent2014_3_4_scaffold_235_17
Vitellibacter vladivostokensis, Vitellibacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

20162..23434
DNA (3273bp) protein (1091aa)
hypothetical protein n=1 Tax=Spirosoma spitsbergense RepID=UPI0003762FA6 rbh
Deoxyribonuclease HsdR {ECO:0000313|EMBL:KJJ39872.1}; TaxID=171194 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Vitellibacter.;" source="Vitellibacter vladivo
HsdR family type I site-specific deoxyribonuclease
NECEvent2014_3_4_scaffold_235_18
Desulfovibrio salexigens, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23434..24117
DNA (684bp) protein (228aa)
Uncharacterized protein n=1 Tax=Desulfovibrio salexigens (strain ATCC 14822 / DSM 2638 / NCIB 8403 / VKM B-1763) RepID=C6BT19_DESAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACS79723.1}; TaxID=526222 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovib
NECEvent2014_3_4_scaffold_235_19
Alkaliphilus oremlandii, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24687..25064)
DNA (378bp) protein (126aa)
Transcriptional regulator, XRE family n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=A8MKN5_ALKOO
XRE family transcriptional regulator
Transcriptional regulator, XRE family {ECO:0000313|EMBL:ABW20367.1}; TaxID=350688 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus oremlan
NECEvent2014_3_4_scaffold_235_20
Thermoanaerobacter italicus, Thermoanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

25232..25426
DNA (195bp) protein (65aa)
Uncharacterized protein n=2 Tax=Thermoanaerobacter RepID=D7ARJ2_THEM3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADD03103.1}; TaxID=580331 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Thermoanaerobacter.;" source="Thermoanae
NECEvent2014_3_4_scaffold_235_21
Natranaerobius thermophilus, Natranaerobius, Natranaerobiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25623..25964
DNA (342bp) protein (114aa)
NERD domain protein n=1 Tax=Natranaerobius thermophilus (strain ATCC BAA-1301 / DSM 18059 / JW/NM-WN-LF) RepID=B2A868_NATTJ
NERD domain-containing protein
NERD domain protein {ECO:0000313|EMBL:ACB84434.1}; TaxID=457570 species="Bacteria; Firmicutes; Clostridia; Natranaerobiales; Natranaerobiaceae; Natranaerobius.;" source="Natranaerobius thermophilus (s
NECEvent2014_3_4_scaffold_235_22
unknown

Not on your lists

26001..26399
DNA (399bp) protein (133aa)

This feature has no annotations

NECEvent2014_3_4_scaffold_235_23
[Clostridium] clariflavum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26719..27594
DNA (876bp) protein (292aa)
Diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45) RepID=G8M0C0_CLOCD rbh
diguanylate cyclase domain-containing protein
Diguanylate cyclase (GGDEF) domain-containing protein {ECO:0000313|EMBL:AEV66927.1}; TaxID=720554 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source
NECEvent2014_3_4_scaffold_235_24
Ruminiclostridium thermocellum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27865..28956
DNA (1092bp) protein (364aa)
Putative uncharacterized protein n=1 Tax=Clostridium thermocellum (strain ATCC 27405 / DSM 1237) RepID=A3DEK4_CLOTH rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABN52383.1}; TaxID=203119 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium thermocellum (st
NECEvent2014_3_4_scaffold_235_25
Paenibacillus sp. FSL H8-237, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

29357..29770
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Exiguobacterium sibiricum (strain DSM 17290 / JCM 13490 / 255-15) RepID=B1YIB4_EXIS2
Uncharacterized protein {ECO:0000313|EMBL:ETT45437.1}; TaxID=1227350 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. FSL H8-237.;"
hypothetical protein
NECEvent2014_3_4_scaffold_235_26
Bacillus cereus, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

30021..30587
DNA (567bp) protein (189aa)
Prophage LambdaSa2, site-specific recombinase, phage integrase family n=2 Tax=Bacillus cereus G9241 RepID=Q4MG29_BACCE
Phage integrase family protein {ECO:0000313|EMBL:AJI02671.1}; TaxID=269801 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus cereus group.;" source="Bacillus cereus G
site-specific recombinase
NECEvent2014_3_4_scaffold_235_27
Bacillus smithii, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

30648..31118
DNA (471bp) protein (157aa)
Putative uncharacterized protein n=1 Tax=Bacillus smithii 7_3_47FAA RepID=G9QJV4_9BACI
Uncharacterized protein {ECO:0000313|EMBL:EHL78543.1}; TaxID=665952 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus smithii 7_3_47FAA.;"
hypothetical protein
NECEvent2014_3_4_scaffold_235_28
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31426..34755
DNA (3330bp) protein (1110aa)
Serine/threonine protein kinase n=1 Tax=Clostridium sp. DL-VIII RepID=G7M974_9CLOT rbh
Serine/threonine protein kinase {ECO:0000313|EMBL:EHJ01941.1}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
protein kinase domain protein
NECEvent2014_3_4_scaffold_235_29
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34758..36092
DNA (1335bp) protein (445aa)
Uncharacterized protein n=1 Tax=Clostridium sp. DL-VIII RepID=G7M973_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:EHJ01940.1}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
hypothetical protein
NECEvent2014_3_4_scaffold_235_30
Methylosarcina fibrata, Methylosarcina, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

36142..36900
DNA (759bp) protein (253aa)
hypothetical protein n=1 Tax=Methylosarcina fibrata RepID=UPI000378835E
Displaying items 1-30 of 35 in total

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