ggKbase home page

pig_ID_445_F78_scaffold_19

Search features with annotation key words

Displaying items 1-30 of 126 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
pig_ID_445_F78_scaffold_19_1
GWF2_Melainabacteria_37_15_curated, Melainabacteria, Bacteria

Not on your lists

2..697
DNA (696bp) protein (232aa)
Putative resolvase id=4465305 bin=GWF2_Melainabacteria_37_15 species=Azospirillum brasilense genus=Azospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Melainabacteria_37_15 organism_group=Melainabacteria
hypothetical protein
Tax=GWF2_Melainabacteria_37_15_curated
pig_ID_445_F78_scaffold_19_2
Vibrio parahaemolyticus, Vibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(736..1281)
DNA (546bp) protein (182aa)
Uncharacterized protein n=1 Tax=Vibrio parahaemolyticus VPCR-2010 RepID=T5JGR4_VIBPH
Uncharacterized protein {ECO:0000313|EMBL:EQM49697.1}; TaxID=1238224 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio.;" source="Vibrio parahaemolyticus VPCR-2010.;"
hypothetical protein
pig_ID_445_F78_scaffold_19_3
Elusimicrobium minutum, Elusimicrobium, Elusimicrobiales, Elusimicrobia, Elusimicrobia, Bacteria

Not on your lists

1924..2415
DNA (492bp) protein (164aa)
Transcriptional regulator n=1 Tax=Elusimicrobium minutum (strain Pei191) RepID=B2KCU2_ELUMP
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:ACC98338.1}; TaxID=445932 species="Bacteria; Elusimicrobia; Elusimicrobia; Elusimicrobiales; Elusimicrobiaceae; Elusimicrobium.;" source="Elusimicrobium minutum (strain Pei191).;"
pig_ID_445_F78_scaffold_19_4
Nitrospina gracilis, Nitrospina, Nitrospinales, Nitrospinia, Nitrospinae, Bacteria

Not on your lists

2415..5825
DNA (3411bp) protein (1137aa)
acylglycerophosphoethanolamine acyltransferase (EC:6.2.1.20) rbh
AMP-dependent synthetase and ligase n=1 Tax=Nitrospina gracilis 3/211 RepID=M1Z1P2_9BACT rbh
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:CCQ91430.1}; TaxID=1266370 species="Bacteria; Nitrospinae; Nitrospinia; Nitrospinales; Nitrospinaceae; Nitrospina.;" source="Nitrospina gracilis (strain 3/211).;"
pig_ID_445_F78_scaffold_19_5
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

5822..6982
DNA (1161bp) protein (387aa)
Phospholipid/glycerol acyltransferase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XCQ9_9BACT
Phospholipid/glycerol acyltransferase {ECO:0000313|EMBL:EEF62255.1}; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
hypothetical protein
pig_ID_445_F78_scaffold_19_6
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

6963..7799
DNA (837bp) protein (279aa)
PAP2 family protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XCQ8_9BACT
PAP2 family protein {ECO:0000313|EMBL:EEF62254.1}; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
PAP2 family protein
pig_ID_445_F78_scaffold_19_7
GWA2_Gallionellales_59_43_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7802..10309
DNA (2508bp) protein (836aa)
Pyruvate phosphate dikinase PEP/pyruvate-binding n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D376_9BACT rbh
phosphoenolpyruvate synthase rbh
Tax=GWA2_Gallionellales_59_43_curated
pig_ID_445_F78_scaffold_19_8
Idiomarina sp. MCCC 1A10513, Idiomarina, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10373..10978)
DNA (606bp) protein (202aa)
Uncharacterized protein n=1 Tax=Pasteurella dagmatis ATCC 43325 RepID=C9PNG4_9PAST
Membrane protein {ECO:0000313|EMBL:KFZ28557.1}; TaxID=1517416 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Idiomarinaceae; Idiomarina.;" source="Idiomarina sp. MCCC 1A10513.;"
Inner membrane protein
pig_ID_445_F78_scaffold_19_9
RIFOXYA2_FULL_Melainabacteria_32_9_curated, Melainabacteria, Bacteria

Not on your lists

11075..11479
DNA (405bp) protein (135aa)
hypothetical protein n=1 Tax=Methylotenera sp. 1P/1 RepID=UPI00038159A2
bacteriophage-like protein
Tax=RIFOXYA2_FULL_Melainabacteria_32_9_curated
pig_ID_445_F78_scaffold_19_10
RIFOXYA2_FULL_Melainabacteria_32_9_curated, Melainabacteria, Bacteria

Not on your lists

11469..12965
DNA (1497bp) protein (499aa)
Putative resolvase n=1 Tax=Brachyspira sp. CAG:484 RepID=R5H6F1_9SPIR
putative resolvase
Tax=RIFOXYA2_FULL_Melainabacteria_32_9_curated
pig_ID_445_F78_scaffold_19_trna_3
unknown

Not on your lists

comp(13085..13159)
DNA (75bp)
transferRNA Asp
pig_ID_445_F78_scaffold_19_11
Elusimicrobium minutum, Elusimicrobium, Elusimicrobiales, Elusimicrobia, Elusimicrobia, Bacteria

Not on your lists

comp(13242..14141)
DNA (900bp) protein (300aa)
UDP-N-acetylenolpyruvoylglucosamine reductase (EC:1.1.1.158) rbh
UDP-N-acetylenolpyruvoylglucosamine reductase {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00041869}; EC=1.3.1.98 {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00057125};; UDP-N-acetylmuramate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00037}; TaxID=445932 species="Bacteria; Elusimicrobia; Elusimicrobia; Elusimicrobiales; Elusimicrobiaceae; Elusimicrobium.;" source="Elusimicrobium minutum (strain Pei191).;"
UDP-N-acetylenolpyruvoylglucosamine reductase n=1 Tax=Elusimicrobium minutum (strain Pei191) RepID=B2KE75_ELUMP rbh
pig_ID_445_F78_scaffold_19_12
unknown

Not on your lists

comp(14143..14841)
DNA (699bp) protein (233aa)
hypothetical protein
pig_ID_445_F78_scaffold_19_13
Elusimicrobium minutum, Elusimicrobium, Elusimicrobiales, Elusimicrobia, Elusimicrobia, Bacteria

Not on your lists

14955..16499
DNA (1545bp) protein (515aa)
Phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain n=1 Tax=Elusimicrobium minutum (strain Pei191) RepID=B2KE73_ELUMP rbh
phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I rbh
Phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain {ECO:0000313|EMBL:ACC98819.1}; TaxID=445932 species="Bacteria; Elusimicrobia; Elusimicrobia; Elusimicrobiales; Elusimicrobiaceae; Elusimicrobium.;" source="Elusimicrobium minutum (strain Pei191).;"
pig_ID_445_F78_scaffold_19_14
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16586..17533
DNA (948bp) protein (316aa)
Uncharacterized protein n=2 Tax=Bacteroides fragilis RepID=K1GWD8_BACFG
Putative membrane protein {ECO:0000313|EMBL:EFR54175.1}; TaxID=457424 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis 3_1_12.;"
hypothetical protein
pig_ID_445_F78_scaffold_19_15
unknown

Not on your lists

17577..18023
DNA (447bp) protein (149aa)

This feature has no annotations

pig_ID_445_F78_scaffold_19_16
Elusimicrobium minutum, Elusimicrobium, Elusimicrobiales, Elusimicrobia, Elusimicrobia, Bacteria

Not on your lists

18042..18632
DNA (591bp) protein (197aa)
Uncharacterized proteobacterial lipoprotein n=1 Tax=Elusimicrobium minutum (strain Pei191) RepID=B2KBR6_ELUMP
lipoprotein
Uncharacterized proteobacterial lipoprotein {ECO:0000313|EMBL:ACC97753.1}; Flags: Precursor;; TaxID=445932 species="Bacteria; Elusimicrobia; Elusimicrobia; Elusimicrobiales; Elusimicrobiaceae; Elusimicrobium.;" source="Elusimicrobium minutum (strain Pei191).;"
pig_ID_445_F78_scaffold_19_17
Elusimicrobium minutum, Elusimicrobium, Elusimicrobiales, Elusimicrobia, Elusimicrobia, Bacteria

Not on your lists

18637..19947
DNA (1311bp) protein (437aa)
Uncharacterized protein n=1 Tax=Elusimicrobium minutum (strain Pei191) RepID=B2KBR7_ELUMP rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ACC97754.1}; Flags: Precursor;; TaxID=445932 species="Bacteria; Elusimicrobia; Elusimicrobia; Elusimicrobiales; Elusimicrobiaceae; Elusimicrobium.;" source="Elusimicrobium minutum (strain Pei191).;"
pig_ID_445_F78_scaffold_19_18
Elusimicrobium minutum, Elusimicrobium, Elusimicrobiales, Elusimicrobia, Elusimicrobia, Bacteria

Not on your lists

19956..20891
DNA (936bp) protein (312aa)
Uncharacterized protein n=1 Tax=Elusimicrobium minutum (strain Pei191) RepID=B2KBR8_ELUMP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACC97755.1}; Flags: Precursor;; TaxID=445932 species="Bacteria; Elusimicrobia; Elusimicrobia; Elusimicrobiales; Elusimicrobiaceae; Elusimicrobium.;" source="Elusimicrobium minutum (strain Pei191).;"
pig_ID_445_F78_scaffold_19_19
Elusimicrobium minutum, Elusimicrobium, Elusimicrobiales, Elusimicrobia, Elusimicrobia, Bacteria

Not on your lists

20898..21599
DNA (702bp) protein (234aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915, ECO:0000256|RuleBase:RU004231}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; Flags: Precursor;; TaxID=445932 species="Bacteria; Elusimicrobia; Elusimicrobia; Elusimicrobiales; Elusimicrobiaceae; Elusimicrobium.;" source="Elusimicrobium minutum (strain Pei191).;"
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Elusimicrobium minutum (strain Pei191) RepID=B2KBR9_ELUMP
FKBP-type peptidylprolyl isomerase
pig_ID_445_F78_scaffold_19_20
unknown

Not on your lists

21599..22183
DNA (585bp) protein (195aa)

This feature has no annotations

pig_ID_445_F78_scaffold_19_21
unknown

Not on your lists

22229..22747
DNA (519bp) protein (173aa)
hypothetical protein
pig_ID_445_F78_scaffold_19_22
Elusimicrobium minutum, Elusimicrobium, Elusimicrobiales, Elusimicrobia, Elusimicrobia, Bacteria

Not on your lists

23204..23806
DNA (603bp) protein (201aa)
Type II secretion system subunit n=1 Tax=Elusimicrobium minutum (strain Pei191) RepID=B2KC41_ELUMP
type II secretion system subunit G
Type II secretion system subunit {ECO:0000313|EMBL:ACC98168.1}; Flags: Precursor;; TaxID=445932 species="Bacteria; Elusimicrobia; Elusimicrobia; Elusimicrobiales; Elusimicrobiaceae; Elusimicrobium.;" source="Elusimicrobium minutum (strain Pei191).;"
pig_ID_445_F78_scaffold_19_23
Elusimicrobium minutum, Elusimicrobium, Elusimicrobiales, Elusimicrobia, Elusimicrobia, Bacteria

Not on your lists

comp(23872..24894)
DNA (1023bp) protein (341aa)
Putative permease n=1 Tax=Elusimicrobium minutum (strain Pei191) RepID=B2KBP9_ELUMP
putative permease
Putative permease {ECO:0000313|EMBL:ACC97736.1}; TaxID=445932 species="Bacteria; Elusimicrobia; Elusimicrobia; Elusimicrobiales; Elusimicrobiaceae; Elusimicrobium.;" source="Elusimicrobium minutum (strain Pei191).;"
pig_ID_445_F78_scaffold_19_24
unknown

Not on your lists

comp(24881..25405)
DNA (525bp) protein (175aa)

This feature has no annotations

pig_ID_445_F78_scaffold_19_25
Elusimicrobium minutum, Elusimicrobium, Elusimicrobiales, Elusimicrobia, Elusimicrobia, Bacteria

Not on your lists

comp(25402..26154)
DNA (753bp) protein (251aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=445932 species="Bacteria; Elusimicrobia; Elusimicrobia; Elusimicrobiales; Elusimicrobiaceae; Elusimicrobium.;" source="Elusimicrobium minutum (strain Pei191).;"
Putative two-component system n=1 Tax=Elusimicrobium minutum (strain Pei191) RepID=B2KBQ1_ELUMP
putative two component system protein
pig_ID_445_F78_scaffold_19_26
Elusimicrobium minutum, Elusimicrobium, Elusimicrobiales, Elusimicrobia, Elusimicrobia, Bacteria

Not on your lists

comp(26164..27042)
DNA (879bp) protein (293aa)
Uncharacterized protein n=1 Tax=Elusimicrobium minutum (strain Pei191) RepID=B2KBQ2_ELUMP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACC97739.1}; Flags: Precursor;; TaxID=445932 species="Bacteria; Elusimicrobia; Elusimicrobia; Elusimicrobiales; Elusimicrobiaceae; Elusimicrobium.;" source="Elusimicrobium minutum (strain Pei191).;"
pig_ID_445_F78_scaffold_19_27
Elusimicrobium minutum, Elusimicrobium, Elusimicrobiales, Elusimicrobia, Elusimicrobia, Bacteria

Not on your lists

27124..28338
DNA (1215bp) protein (405aa)
Putative phosphohydrolase n=1 Tax=Elusimicrobium minutum (strain Pei191) RepID=B2KBQ3_ELUMP rbh
putative phosphohydrolase rbh
Putative phosphohydrolase {ECO:0000313|EMBL:ACC97740.1}; Flags: Precursor;; TaxID=445932 species="Bacteria; Elusimicrobia; Elusimicrobia; Elusimicrobiales; Elusimicrobiaceae; Elusimicrobium.;" source="Elusimicrobium minutum (strain Pei191).;"
pig_ID_445_F78_scaffold_19_trna_1
unknown

Not on your lists

28396..28469
DNA (74bp)
transferRNA Met
pig_ID_445_F78_scaffold_19_28
Elusimicrobium minutum, Elusimicrobium, Elusimicrobiales, Elusimicrobia, Elusimicrobia, Bacteria

Not on your lists

28553..29560
DNA (1008bp) protein (336aa)
Glycosyl transferase n=1 Tax=Elusimicrobium minutum (strain Pei191) RepID=B2KEB0_ELUMP
glycosyl transferase
Glycosyl transferase {ECO:0000313|EMBL:ACC98856.1}; TaxID=445932 species="Bacteria; Elusimicrobia; Elusimicrobia; Elusimicrobiales; Elusimicrobiaceae; Elusimicrobium.;" source="Elusimicrobium minutum (strain Pei191).;"
Displaying items 1-30 of 126 in total

View Taxonomy