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bjp_ig2103_scaffold_248_curated

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Displaying items 1-30 of 59 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
bjp_ig2103_scaffold_248_curated_1
unknown

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comp(198..7118)
DNA (6921bp) protein (2307aa)
id=4369150 bin=GWC2_ACD39_50_8 species=ACD39 genus=ACD39 taxon_order=ACD39 taxon_class=ACD39 phylum=unknown tax=GWC2_ACD39_50_8 organism_group=ACD39
bjp_ig2103_scaffold_248_curated_2
unknown

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8187..9389
DNA (1203bp) protein (401aa)
Putative selenium metabolism hydrolase id=3185676 bin=GWF2_Bacteroidetes_33_38 species=unknown genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWF2_Bacteroidetes_33_38 organism_group=Bacteroidetes organism_desc=a699
selenium metabolism hydrolase rbh
bjp_ig2103_scaffold_248_curated_3
unknown

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9471..10661
DNA (1191bp) protein (397aa)
Uncharacterized protein YgeW id=3271728 bin=GWC2_ACD39_50_8 species=unknown genus=unknown taxon_order=Enterobacteriales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_ACD39_50_8 organism_group=ACD39
ygeW; putative carbamoyltransferase rbh
bjp_ig2103_scaffold_248_curated_4
unknown

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11012..11998
DNA (987bp) protein (329aa)
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen id=3271727 bin=GWC2_ACD39_50_8 species=Opitutus terrae genus=Opitutus taxon_order=unknown taxon_class=Opitutae phylum=Verrucomicrobia tax=GWC2_ACD39_50_8 organism_group=ACD39
alkyl hydroperoxide reductase
bjp_ig2103_scaffold_248_curated_5
unknown

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comp(12182..15142)
DNA (2961bp) protein (987aa)
PAS sensor protein id=3271726 bin=GWC2_ACD39_50_8 species=ACD39 genus=ACD39 taxon_order=ACD39 taxon_class=ACD39 phylum=unknown tax=GWC2_ACD39_50_8 organism_group=ACD39
multi-sensor hybrid histidine kinase
bjp_ig2103_scaffold_248_curated_6
unknown

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comp(15194..16531)
DNA (1338bp) protein (446aa)
Putative selenium metabolism protein SsnA id=3271725 bin=GWC2_ACD39_50_8 species=Desulfosporosinus orientis genus=Desulfosporosinus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_ACD39_50_8 organism_group=ACD39
putative selenium metabolism protein SsnA rbh
bjp_ig2103_scaffold_248_curated_7
unknown

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comp(16730..18097)
DNA (1368bp) protein (456aa)
putative hydrolase; K03382 hydroxyatrazine ethylaminohydrolase [EC:3.5.99.3] rbh
Putative hydrolase id=3055478 bin=GWC2_ACD39_50_8 species=Caldisericum exile genus=Caldisericum taxon_order=Caldisericales taxon_class=Caldisericia phylum=Caldiserica tax=GWC2_ACD39_50_8 organism_group=ACD39
bjp_ig2103_scaffold_248_curated_8
unknown

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comp(18176..20923)
DNA (2748bp) protein (916aa)
Tetratricopeptide TPR_1 repeat-containing protein id=3055474 bin=GWC2_ACD39_50_8 species=ACD39 genus=ACD39 taxon_order=ACD39 taxon_class=ACD39 phylum=unknown tax=GWC2_ACD39_50_8 organism_group=ACD39
tetratricopeptide tpr_1 repeat-containing protein
bjp_ig2103_scaffold_248_curated_9
unknown

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21120..22802
DNA (1683bp) protein (561aa)
Protein translocase subunit SecD id=3055473 bin=GWC2_ACD39_50_8 species=ACD39 genus=ACD39 taxon_order=ACD39 taxon_class=ACD39 phylum=unknown tax=GWC2_ACD39_50_8 organism_group=ACD39
secD; preprotein translocase subunit SecD; K03072 preprotein translocase subunit SecD rbh
bjp_ig2103_scaffold_248_curated_10
unknown

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22824..23741
DNA (918bp) protein (306aa)
Protein-export membrane protein SecF n=1 Tax=uncultured bacterium RepID=K2CAM8_9BACT rbh
protein-export membrane protein SecF; K03074 preprotein translocase subunit SecF
bjp_ig2103_scaffold_248_curated_11

Not on your lists

23803..24255
DNA (453bp) protein (151aa)
D-aminoacyl-tRNA deacylase {ECO:0000256|HAMAP-Rule:MF_00518, ECO:0000256|SAAS:SAAS00160054}; EC=3.1.1.96 {ECO:0000256|HAMAP-Rule:MF_00518, ECO:0000256|SAAS:SAAS00160046};; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
dtd; D-tyrosyl-tRNA(Tyr) deacylase; K07560 D-tyrosyl-tRNA(Tyr) deacylase [EC:3.1.-.-]
D-tyrosyl-tRNA(Tyr) deacylase n=1 Tax=uncultured bacterium RepID=K2CPR3_9BACT
bjp_ig2103_scaffold_248_curated_12
unknown

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comp(24250..24672)
DNA (423bp) protein (141aa)
transmembrane_regions 21..43 id=46569 bin=ACD39 species=ACD39 genus=ACD39 taxon_order=ACD39 taxon_class=ACD39 phylum=unknown tax=ACD39 organism_group=Unknown_CP organism_desc=unknown
bjp_ig2103_scaffold_248_curated_13
unknown

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comp(24672..27167)
DNA (2496bp) protein (832aa)
peptidase C14, caspase catalytic subunit P20 id=47809 bin=ACD39 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=ACD39 organism_group=Unknown_CP organism_desc=unknown rbh
peptidase C14, caspase catalytic subunit p20
bjp_ig2103_scaffold_248_curated_14
unknown

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comp(27164..29617)
DNA (2454bp) protein (818aa)
Peptidase C14, caspase catalytic subunit P20 (Fragment) n=1 Tax=uncultured bacterium RepID=K2D9S2_9BACT
peptidase C14, caspase catalytic subunit p20
bjp_ig2103_scaffold_248_curated_15
unknown

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29830..30069
DNA (240bp) protein (80aa)

This feature has no annotations

bjp_ig2103_scaffold_248_curated_16
unknown

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comp(30070..30705)
DNA (636bp) protein (212aa)

This feature has no annotations

bjp_ig2103_scaffold_248_curated_17
unknown

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comp(30715..31410)
DNA (696bp) protein (232aa)

This feature has no annotations

bjp_ig2103_scaffold_248_curated_18
unknown

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comp(31447..31704)
DNA (258bp) protein (86aa)

This feature has no annotations

bjp_ig2103_scaffold_248_curated_19
Eubacterium sp. CAG:274, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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31928..36025
DNA (4098bp) protein (1366aa)
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=1262888 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:274.;"
DNA-directed RNA polymerase subunit beta; K03043 DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] rbh
DNA-directed RNA polymerase subunit beta n=1 Tax=Eubacterium sp. CAG:274 RepID=R6QC34_9FIRM rbh
bjp_ig2103_scaffold_248_curated_20
unknown

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36067..42135
DNA (6069bp) protein (2023aa)
rpoC; DNA-directed RNA polymerase beta' subunit (EC:2.7.7.6); K03046 DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] rbh
DNA-directed RNA polymerase id=3964493 bin=GWC2_ACD39_50_8 species=ACD39 genus=ACD39 taxon_order=ACD39 taxon_class=ACD39 phylum=unknown tax=GWC2_ACD39_50_8 organism_group=ACD39
bjp_ig2103_scaffold_248_curated_21
unknown

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42348..42722
DNA (375bp) protein (125aa)
30S ribosomal protein S12 id=4809453 bin=GWC2_ACD39_50_8 species=Clostridium colicanis genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_ACD39_50_8 organism_group=ACD39
rpsL; 30S ribosomal protein S12; K02950 small subunit ribosomal protein S12
bjp_ig2103_scaffold_248_curated_22
unknown

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42736..43209
DNA (474bp) protein (158aa)
30S ribosomal protein S7 id=4809454 bin=GWC2_ACD39_50_8 species=Deferribacter desulfuricans genus=Deferribacter taxon_order=Deferribacterales taxon_class=Deferribacteres phylum=Deferribacteres tax=GWC2_ACD39_50_8 organism_group=ACD39
rpsG; 30S ribosomal protein S7
bjp_ig2103_scaffold_248_curated_23
unknown

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43256..45382
DNA (2127bp) protein (709aa)
Elongation factor G id=4809455 bin=GWC2_ACD39_50_8 species=unknown genus=Thermodesulfobacterium taxon_order=Thermodesulfobacteriales taxon_class=Thermodesulfobacteria phylum=Thermodesulfobacteria tax=GWC2_ACD39_50_8 organism_group=ACD39
translation elongation factor G; K02355 elongation factor G rbh
bjp_ig2103_scaffold_248_curated_24
unknown

Not on your lists


45427..45738
DNA (312bp) protein (104aa)
30S ribosomal protein S10 id=4809456 bin=GWC2_ACD39_50_8 species=unknown genus=Desulfitobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_ACD39_50_8 organism_group=ACD39
rpsJ; 30S ribosomal protein S10; K02946 small subunit ribosomal protein S10
bjp_ig2103_scaffold_248_curated_25
unknown

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45766..46389
DNA (624bp) protein (208aa)
50S ribosomal protein L3 id=4809457 bin=GWC2_ACD39_50_8 species=Caloramator australicus genus=Caloramator taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_ACD39_50_8 organism_group=ACD39
rplC; 50S ribosomal protein L3; K02906 large subunit ribosomal protein L3
bjp_ig2103_scaffold_248_curated_26
Desulfotomaculum gibsoniae, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

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46405..47025
DNA (621bp) protein (207aa)
50S ribosomal protein L4 n=1 Tax=Desulfotomaculum gibsoniae DSM 7213 RepID=R4KBI1_9FIRM
50S ribosomal protein L4, bacterial/organelle
50S ribosomal protein L4 {ECO:0000256|HAMAP-Rule:MF_01328}; TaxID=767817 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum gibsoniae DSM 7213.;"
bjp_ig2103_scaffold_248_curated_27
unknown

Not on your lists


47022..47312
DNA (291bp) protein (97aa)
50S ribosomal protein L23 id=4809459 bin=GWC2_ACD39_50_8 species=Cryptobacterium curtum genus=Cryptobacterium taxon_order=Coriobacteriales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_ACD39_50_8 organism_group=ACD39
50S ribosomal protein L23P; K02892 large subunit ribosomal protein L23
bjp_ig2103_scaffold_248_curated_28
unknown

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47334..48161
DNA (828bp) protein (276aa)
50S ribosomal protein L2 id=4809460 bin=GWC2_ACD39_50_8 species=unknown genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_ACD39_50_8 organism_group=ACD39
50S ribosomal protein L2; K02886 large subunit ribosomal protein L2 rbh
bjp_ig2103_scaffold_248_curated_29
unknown

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48174..48443
DNA (270bp) protein (90aa)
SSU ribosomal protein S19P id=4809461 bin=GWC2_ACD39_50_8 species=Syntrophobotulus glycolicus genus=Syntrophobotulus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_ACD39_50_8 organism_group=ACD39
hypothetical protein; K02965 small subunit ribosomal protein S19
bjp_ig2103_scaffold_248_curated_30
unknown

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48460..49200
DNA (741bp) protein (247aa)
50S ribosomal protein L22 id=4809462 bin=GWC2_ACD39_50_8 species=Syntrophobotulus glycolicus genus=Syntrophobotulus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_ACD39_50_8 organism_group=ACD39
50S ribosomal protein L22; K02890 large subunit ribosomal protein L22
Displaying items 1-30 of 59 in total

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