ggKbase home page

bjp_ig2103_scaffold_5_curated

Search features with annotation key words

Displaying items 1-30 of 307 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
bjp_ig2103_scaffold_5_curated_1
unknown

Not on your lists

comp(78..3749)
DNA (3672bp) protein (1224aa)
gca:Galf_0755 multi-sensor hybrid histidine kinase; K11527 two-component system, unclassified family, sensor histidine kinase and response regulator [EC:2.7.13.3] id=46477 bin=ACD39 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=ACD39 organism_group=Unknown_CP organism_desc=unknown rbh
PAS domain-containing protein rbh
bjp_ig2103_scaffold_5_curated_2
unknown

Not on your lists

comp(3792..7457)
DNA (3666bp) protein (1222aa)
PAS domain S-box id=4630584 bin=GWC2_ACD39_50_8 species=ACD39 genus=ACD39 taxon_order=ACD39 taxon_class=ACD39 phylum=unknown tax=GWC2_ACD39_50_8 organism_group=ACD39
PAS domain-containing protein rbh
bjp_ig2103_scaffold_5_curated_3

Not on your lists

comp(7493..8620)
DNA (1128bp) protein (376aa)
adenylate/guanylate cyclase id=47468 bin=ACD39 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=ACD39 organism_group=Unknown_CP organism_desc=unknown rbh
Adenylate/guanylate cyclase {ECO:0000313|EMBL:EKD81337.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
adenylate/guanylate cyclase
bjp_ig2103_scaffold_5_curated_4
unknown

Not on your lists

8983..9210
DNA (228bp) protein (76aa)

This feature has no annotations

bjp_ig2103_scaffold_5_curated_5

Not on your lists

9207..11039
DNA (1833bp) protein (611aa)
biotin/lipoyl attachment domain-containing protein; K01960 pyruvate carboxylase subunit B [EC:6.4.1.1] rbh
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2E1U7_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:EKE03347.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
bjp_ig2103_scaffold_5_curated_6
unknown

Not on your lists

11061..12200
DNA (1140bp) protein (380aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2DC41_9BACT rbh
sodium ion-translocating decarboxylase subunit beta rbh
bjp_ig2103_scaffold_5_curated_7
unknown

Not on your lists

comp(12216..13865)
DNA (1650bp) protein (550aa)
id=4630582 bin=GWC2_ACD39_50_8 species=ACD39 genus=ACD39 taxon_order=ACD39 taxon_class=ACD39 phylum=unknown tax=GWC2_ACD39_50_8 organism_group=ACD39
bjp_ig2103_scaffold_5_curated_8
unknown

Not on your lists

14043..15581
DNA (1539bp) protein (513aa)
Putative uncharacterized protein id=4630581 bin=GWC2_ACD39_50_8 species=ACD39 genus=ACD39 taxon_order=ACD39 taxon_class=ACD39 phylum=unknown tax=GWC2_ACD39_50_8 organism_group=ACD39
methyl-accepting chemotaxis protein
bjp_ig2103_scaffold_5_curated_9
unknown

Not on your lists

15830..16882
DNA (1053bp) protein (351aa)
ribosomal RNA large subunit methyltransferase N; K06941 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
Probable dual-specificity RNA methyltransferase RlmN id=4630580 bin=GWC2_ACD39_50_8 species=Kosmotoga olearia genus=Kosmotoga taxon_order=Thermotogales taxon_class=Thermotogae phylum=Thermotogae tax=GWC2_ACD39_50_8 organism_group=ACD39
bjp_ig2103_scaffold_5_curated_10
unknown

Not on your lists

16875..18026
DNA (1152bp) protein (384aa)
serine/threonine protein kinase with PASTA sensor(s); K08884 serine/threonine protein kinase, bacterial [EC:2.7.11.1]
Serine/threonine protein kinase with PASTA sensor(S) id=4630579 bin=GWC2_ACD39_50_8 species=ACD39 genus=ACD39 taxon_order=ACD39 taxon_class=ACD39 phylum=unknown tax=GWC2_ACD39_50_8 organism_group=ACD39
bjp_ig2103_scaffold_5_curated_11
unknown

Not on your lists

18054..19307
DNA (1254bp) protein (418aa)
prkC; serine/threonine-protein kinase; K08884 serine/threonine protein kinase, bacterial [EC:2.7.11.1]
Serine/threonine protein kinase id=4630578 bin=GWC2_ACD39_50_8 species=ACD39 genus=ACD39 taxon_order=ACD39 taxon_class=ACD39 phylum=unknown tax=GWC2_ACD39_50_8 organism_group=ACD39
bjp_ig2103_scaffold_5_curated_12
unknown

Not on your lists

19313..19969
DNA (657bp) protein (219aa)
ribulose-phosphate 3-epimerase (EC:5.1.3.1); K01783 ribulose-phosphate 3-epimerase [EC:5.1.3.1]
Ribulose-phosphate 3-epimerase id=4630577 bin=GWC2_ACD39_50_8 species=ACD39 genus=ACD39 taxon_order=ACD39 taxon_class=ACD39 phylum=unknown tax=GWC2_ACD39_50_8 organism_group=ACD39
bjp_ig2103_scaffold_5_curated_13
unknown

Not on your lists

20102..21445
DNA (1344bp) protein (448aa)
TPR repeat-containing protein id=48472 bin=ACD39 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=ACD39 organism_group=Unknown_CP organism_desc=unknown rbh
hypothetical protein
bjp_ig2103_scaffold_5_curated_14
unknown

Not on your lists

comp(21510..22238)
DNA (729bp) protein (243aa)
peptidase A24A domain-containing protein; K02654 leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
Type 4 prepilin-like proteins leader peptide-processing enzyme id=4630575 bin=GWC2_ACD39_50_8 species=ACD39 genus=ACD39 taxon_order=ACD39 taxon_class=ACD39 phylum=unknown tax=GWC2_ACD39_50_8 organism_group=ACD39
bjp_ig2103_scaffold_5_curated_15
unknown

Not on your lists

comp(22370..22726)
DNA (357bp) protein (119aa)
Putative type IV pilin id=4630574 bin=GWC2_ACD39_50_8 species=Plesiocystis pacifica genus=Plesiocystis taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_ACD39_50_8 organism_group=ACD39
DNA transport exogenous DNA-binding protein; K02245 competence protein ComGC
bjp_ig2103_scaffold_5_curated_16
Leptospira noguchii, Leptospira, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

22930..23508
DNA (579bp) protein (193aa)
methyltransferase type 11 n=1 Tax=Omnitrophica bacterium SCGC AAA257-O07 RepID=UPI0003B76621
Methyltransferase domain protein {ECO:0000313|EMBL:EMO43145.1}; TaxID=1085540 species="Bacteria; Spirochaetes; Leptospirales; Leptospiraceae; Leptospira.;" source="Leptospira noguchii serovar Autumnalis str. ZUN142.;"
type 11 methyltransferase
bjp_ig2103_scaffold_5_curated_17
unknown

Not on your lists

comp(23514..25241)
DNA (1728bp) protein (576aa)

This feature has no annotations

bjp_ig2103_scaffold_5_curated_18
unknown

Not on your lists

25443..27287
DNA (1845bp) protein (615aa)
hypothetical protein id=41922 bin=ACD37 species=ACD37 genus=ACD37 taxon_order=ACD37 taxon_class=ACD37 phylum=OP11 tax=ACD37 organism_group=OP11 (Microgenomates) organism_desc=OP11
bjp_ig2103_scaffold_5_curated_19
unknown

Not on your lists

27371..29149
DNA (1779bp) protein (593aa)
Uncharacterized protein id=2633615 bin=GWA1_Kazan_50_15 species=GWC1_KAZAN_52_13 genus=GWC1_KAZAN_52_13 taxon_order=GWC1_KAZAN_52_13 taxon_class=GWC1_KAZAN_52_13 phylum=KAZAN tax=GWA1_Kazan_50_15 organism_group=Kazan organism_desc=Probably Kazan: candidate for curation
bjp_ig2103_scaffold_5_curated_20
unknown

Not on your lists

29265..31055
DNA (1791bp) protein (597aa)

This feature has no annotations

bjp_ig2103_scaffold_5_curated_21
unknown

Not on your lists

31381..32280
DNA (900bp) protein (300aa)
Glycosyl transferase, family 2 id=3471022 bin=GWA2_Elusimicrobia_56_46 species=Magnetospirillum gryphiswaldense genus=Magnetospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_56_46 organism_group=Elusimicrobia organism_desc=Good
family 2 glycosyl transferase
bjp_ig2103_scaffold_5_curated_22
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32249..33793
DNA (1545bp) protein (515aa)
Uncharacterized protein n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6F5L7_9PROT rbh
Uncharacterized protein {ECO:0000313|EMBL:CDL00677.1}; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense MSR-1 v2.;"
hypothetical protein
bjp_ig2103_scaffold_5_curated_23
unknown

Not on your lists

33797..35674
DNA (1878bp) protein (626aa)
asparagine synthase; K01953 asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] rbh
Asparagine synthetase id=1824286 bin=GWD2_Deltaproteobacteria_55_8 species=Singulisphaera acidiphila genus=Singulisphaera taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
bjp_ig2103_scaffold_5_curated_24
unknown

Not on your lists

35671..37515
DNA (1845bp) protein (615aa)
Tetratricopeptide TPR_2 repeat-containing protein id=1822733 bin=GWE2_Bacteroidetes_29_8 species=Haliscomenobacter hydrossis genus=Haliscomenobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_29_8 organism_group=Bacteroidetes organism_desc=Good
Tetratricopeptide TPR_2 repeat protein
bjp_ig2103_scaffold_5_curated_25
unknown

Not on your lists

comp(37674..38783)
DNA (1110bp) protein (370aa)
Methylase involved in ubiquinone/menaquinone biosynthesis id=4532126 bin=GWA2_OP3_52_12 species=Bradyrhizobium sp. YR681 genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_OP3_52_12 organism_group=OP3 (Omnitrophica) organism_desc=Genome is FULL of scaffolding errors
bjp_ig2103_scaffold_5_curated_26
unknown

Not on your lists

comp(38797..39858)
DNA (1062bp) protein (354aa)
Twitching motility protein PilT id=4630573 bin=GWC2_ACD39_50_8 species=Deferribacter desulfuricans genus=Deferribacter taxon_order=Deferribacterales taxon_class=Deferribacteres phylum=Deferribacteres tax=GWC2_ACD39_50_8 organism_group=ACD39
twitching motility protein PilT; K02669 twitching motility protein PilT rbh
bjp_ig2103_scaffold_5_curated_27
unknown

Not on your lists

comp(39980..41809)
DNA (1830bp) protein (610aa)
Type IV pilus biogenesis protein PilB id=4630572 bin=GWC2_ACD39_50_8 species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_ACD39_50_8 organism_group=ACD39
type II secretion system protein E rbh
bjp_ig2103_scaffold_5_curated_28
unknown

Not on your lists

comp(41883..42716)
DNA (834bp) protein (278aa)
shikimate 5-dehydrogenase; K00014 shikimate dehydrogenase [EC:1.1.1.25]
Shikimate dehydrogenase id=4630571 bin=GWC2_ACD39_50_8 species=Hydrogenobacter thermophilus genus=Hydrogenobacter taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=GWC2_ACD39_50_8 organism_group=ACD39
bjp_ig2103_scaffold_5_curated_29
unknown

Not on your lists

comp(43159..43503)
DNA (345bp) protein (115aa)
Anti-sigma-factor antagonist id=4630570 bin=GWC2_ACD39_50_8 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWC2_ACD39_50_8 organism_group=ACD39
anti-anti-sigma regulatory factor
bjp_ig2103_scaffold_5_curated_30
unknown

Not on your lists

comp(43617..44576)
DNA (960bp) protein (320aa)
Putative uncharacterized protein id=4630569 bin=GWC2_ACD39_50_8 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_ACD39_50_8 organism_group=ACD39
hypothetical protein
Displaying items 1-30 of 307 in total

View Taxonomy